Mercurial > repos > fubar > weblogo3
comparison tool_dependencies.xml @ 1:25432d42ad5e draft
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author | fubar |
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date | Tue, 24 Sep 2013 22:35:25 -0400 |
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0:ea6678917716 | 1:25432d42ad5e |
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1 | |
2 <?xml version="1.0"?> | |
3 <tool_dependency> | |
4 <package name="numpy" version="1.7"> | |
5 <repository name="package_numpy_1_7" owner="blankenberg" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | |
6 </package> | |
7 <package name="ghostscript" version="9.07"> | |
8 <repository name="package_ghostscript_9_07" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" /> | |
9 </package> | |
10 <package name="package_weblogo" version="3.3"> | |
11 <install version="1.0"> | |
12 <actions> | |
13 <!-- populate the environment variables from the dependend repos --> | |
14 <action type="set_environment_for_install"> | |
15 <repository changeset_revision="10222a7db54c" name="package_ghostscript_9_07" owner="fubar" toolshed="http://testtoolshed.g2.bx.psu.edu/"> | |
16 <package name="ghostscript" version="9.07" /> | |
17 </repository> | |
18 <repository name="package_numpy_1_7" owner="blankenberg" toolshed="http://testtoolshed.g2.bx.psu.edu/"> | |
19 <package name="numpy" version="1.7" /> | |
20 </repository> | |
21 </action> | |
22 <!-- install weblogo --> | |
23 <action type="make_directory">$INSTALL_DIR/lib/python</action> | |
24 <action type="download_by_url">http://weblogo.googlecode.com/files/weblogo-3.3.tar.gz</action> | |
25 <action type="shell_command">export PYTHONPATH=$INSTALL_DIR/lib/python:$PYTHONPATH_NUMPY:$PYTHONPATH && | |
26 python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action> | |
27 <action type="set_environment"> | |
28 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> | |
29 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> | |
30 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> | |
31 <environment_variable action="set_to" name="PYTHONPATH_WEBLOGO">$INSTALL_DIR/lib/python</environment_variable> | |
32 </action> | |
33 </actions> | |
34 </install> | |
35 <readme> | |
36 </readme> | |
37 </package> | |
38 </tool_dependency> |