Mercurial > repos > fubar > rnastar_2_3_0e

view tool-data/rnastar_indices.loc.sample @ 5:2700820cbec1 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author fubar
date Fri, 09 Aug 2013 04:30:15 -0400
parents 7ec5dfde90a3
children
line wrap: on
line source

#This is a sample file distributed with Galaxy that enables tools
#to use a directory of rna-star indexed sequences data files. You will
#need to create these data files and then create a bowtie_indices.loc
#file similar to this one (store it in this directory) that points to
#the directories in which those files are stored. The bowtie2_indices.loc
#file has this format (longer white space characters are TAB characters):
#
#<unique_build_id>   <dbkey>   <display_name>   <file_base_path>
#
hg19	hg19	hg19 full	/data/ucsc/hg19/rnastar
hg18	hg18	hg18 full	/data/ucsc/hg18/rnastar
mm9	mm9	mm9 full	/data/ucsc/mm9/rnastar
mm10	mm10	mm10 full	/data/ucsc/mm10/rnastar
rn4	rn4	rn4 full	/data/ucsc/rn4/rnastar
rn5	rn5	rn5 full	/data/ucsc/rn5/rnastar