Mercurial > repos > fubar > rgrnastar_203e

changeset 23:64d3abfb8535 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author fubar
date Wed, 05 Mar 2014 18:56:30 -0500
parents fae0710c14c9
children a711b92d85c1
files rg_rnaStar.xml tool_dependencies.xml
diffstat 2 files changed, 5 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/rg_rnaStar.xml	Tue Mar 04 23:30:56 2014 -0500
+++ b/rg_rnaStar.xml	Wed Mar 05 18:56:30 2014 -0500
@@ -1,9 +1,9 @@
 <tool id="rna_star" name="RNA-STAR" version="0.23">
     <description>Gapped-read mapper for RNA-seq data</description>
     <requirements>
-        <requirement type="package" version="2.3.0e">rnastar</requirement>
+        <requirement type="package" version="2.3.1z">rnastar</requirement>
         <requirement type="package" version="0.1.19">samtools</requirement>
-        <requirement type="package" version="2.3.0e">starwrapper</requirement>
+        <requirement type="package" version="2.3.1z">starwrapper</requirement>
     </requirements>
     <command>
     ##
--- a/tool_dependencies.xml	Tue Mar 04 23:30:56 2014 -0500
+++ b/tool_dependencies.xml	Wed Mar 05 18:56:30 2014 -0500
@@ -1,12 +1,12 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="rnastar" version="2.3.0e">
-        <repository changeset_revision="6d7b8769237e" name="package_rnastar_230e" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
+    <package name="rnastar" version="2.3.1z">
+        <repository changeset_revision="0fa7feb9b4a8" name="package_rnastar_2_3_1z" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
     <package name="samtools" version="0.1.19">
         <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
     </package>
-    <package name="starwrapper" version="2.3.0e">
+    <package name="starwrapper" version="2.3.1z">
         <readme>
 Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ 
 STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library