Mercurial > repos > fubar > rgrnastar_203e
comparison tool_dependencies.xml @ 26:79a6af1a7c79 draft
Uploaded
| author | iuc |
|---|---|
| date | Thu, 26 Feb 2015 22:41:22 -0500 |
| parents | 1903b1fe70fc |
| children | 99ea1fc51f4b |
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| 25:1903b1fe70fc | 26:79a6af1a7c79 |
|---|---|
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="rnastar" version="2.4.0d"> | 3 <package name="rnastar" version="2.4.0d"> |
| 4 <repository changeset_revision="2ab1b6182b63" name="package_rnastar_240d" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="2ab1b6182b63" name="package_rnastar_240d" owner="fubar" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="samtools" version="0.1.19"> | 6 <package name="samtools" version="0.1.19"> |
| 7 <repository changeset_revision="8b98841b6b2f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="0e56e4dac6e7" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 8 </package> | 8 </package> |
| 9 | 9 |
| 10 <readme> | 10 <readme> |
| 11 Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ | 11 Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/ |
| 12 STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library | 12 STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library |