annotate tool_dependencies.xml @ 20:1a6e7d108f8b draft

Uploaded
author fubar
date Tue, 04 Mar 2014 18:57:15 -0500
parents ca0e1cfec8c7
children a2292db4c24a
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
15
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
1 <?xml version="1.0"?>
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
2 <tool_dependency>
19
ca0e1cfec8c7 Uploaded
fubar
parents: 16
diff changeset
3 <package name="rnastar" version="2.3.0e">
15
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
4 <repository changeset_revision="6dcdb10d0d8b" name="package_rnastar_230e" owner="fubar" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
5 </package>
19
ca0e1cfec8c7 Uploaded
fubar
parents: 16
diff changeset
6 <package name="samtools" version="0.1.19">
15
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
7 <repository changeset_revision="54195f1d4b0f" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu/" />
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
8 </package>
19
ca0e1cfec8c7 Uploaded
fubar
parents: 16
diff changeset
9 <package name="star" version="2.3.0e">
15
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
10 <readme>
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
11 Installs the STAR wrapper and dependency packages samtools and star - see https://code.google.com/p/rna-star/
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
12 STAR is a very fast mapper for rna-seq giving junctions if the indexes are constructed with a junction library
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
13 </readme>
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
14 </package>
9d72d0221c7f Changed over to a separate STAR package dependency
fubar
parents:
diff changeset
15 </tool_dependency>