Mercurial > repos > fubar > rg_gsea
diff rgGSEA/gseaChip_3.1_symbols.loc.sample @ 2:71fa159646c9 draft
Uploaded
| author | fubar |
|---|---|
| date | Sun, 09 Jun 2013 02:01:13 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/rgGSEA/gseaChip_3.1_symbols.loc.sample Sun Jun 09 02:01:13 2013 -0400 @@ -0,0 +1,141 @@ +# generated by makeGSEAloc.py at 24/01/2013 10:43:16 from path = /data/genomes/gsea/3.1 +# loc file for the rgGSEA tool pointing to files from ftp://gseaftp.broadinstitute.org/pub/gsea/annotations +# name value path +AFFYMETRIX AFFYMETRIX /data/genomes/gsea/3.1/AFFYMETRIX.chip +AG AG /data/genomes/gsea/3.1/AG.chip +APPLERA_ABI1700 APPLERA_ABI1700 /data/genomes/gsea/3.1/APPLERA_ABI1700.chip +ATH1_121501 ATH1_121501 /data/genomes/gsea/3.1/ATH1_121501.chip +Agilent_Human1A Agilent_Human1A /data/genomes/gsea/3.1/Agilent_Human1A.chip +Agilent_Human1Av2 Agilent_Human1Av2 /data/genomes/gsea/3.1/Agilent_Human1Av2.chip +Agilent_Human1B Agilent_Human1B /data/genomes/gsea/3.1/Agilent_Human1B.chip +Agilent_Human1_cDNA Agilent_Human1_cDNA /data/genomes/gsea/3.1/Agilent_Human1_cDNA.chip +Agilent_HumanGenome Agilent_HumanGenome /data/genomes/gsea/3.1/Agilent_HumanGenome.chip +Agilent_MouseDev Agilent_MouseDev /data/genomes/gsea/3.1/Agilent_MouseDev.chip +Agilent_MouseGenome Agilent_MouseGenome /data/genomes/gsea/3.1/Agilent_MouseGenome.chip +Agilent_MouseOligo Agilent_MouseOligo /data/genomes/gsea/3.1/Agilent_MouseOligo.chip +Agilent_Mouse_cDNA Agilent_Mouse_cDNA /data/genomes/gsea/3.1/Agilent_Mouse_cDNA.chip +Agilent_RatGenome_G4131A Agilent_RatGenome_G4131A /data/genomes/gsea/3.1/Agilent_RatGenome_G4131A.chip +Agilent_RatOligo Agilent_RatOligo /data/genomes/gsea/3.1/Agilent_RatOligo.chip +AtlasMouse1.2 AtlasMouse1.2 /data/genomes/gsea/3.1/AtlasMouse1.2.chip +AtlasRat1.2 AtlasRat1.2 /data/genomes/gsea/3.1/AtlasRat1.2.chip +BIAO BIAO /data/genomes/gsea/3.1/BIAO.chip +Bovine Bovine /data/genomes/gsea/3.1/Bovine.chip +CNMCMuscleChip CNMCMuscleChip /data/genomes/gsea/3.1/CNMCMuscleChip.chip +Caltech16KMouse Caltech16KMouse /data/genomes/gsea/3.1/Caltech16KMouse.chip +Caltech16KOligoMouse Caltech16KOligoMouse /data/genomes/gsea/3.1/Caltech16KOligoMouse.chip +Canine_2 Canine_2 /data/genomes/gsea/3.1/Canine_2.chip +Clontech_Atlas_13K Clontech_Atlas_13K /data/genomes/gsea/3.1/Clontech_Atlas_13K.chip +Clontech_BD_Atlas Clontech_BD_Atlas /data/genomes/gsea/3.1/Clontech_BD_Atlas.chip +CodeLink_Human_Whole_Genome CodeLink_Human_Whole_Genome /data/genomes/gsea/3.1/CodeLink_Human_Whole_Genome.chip +CodeLink_UniSet_Human_20K_I_Bioarray CodeLink_UniSet_Human_20K_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_20K_I_Bioarray.chip +CodeLink_UniSet_Human_II_Bioarray CodeLink_UniSet_Human_II_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_II_Bioarray.chip +CodeLink_UniSet_Human_I_Bioarray CodeLink_UniSet_Human_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_I_Bioarray.chip +CodeLink_UniSet_Rat_I_Bioarray CodeLink_UniSet_Rat_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Rat_I_Bioarray.chip +DrosGenome1 DrosGenome1 /data/genomes/gsea/3.1/DrosGenome1.chip +Drosophila_2 Drosophila_2 /data/genomes/gsea/3.1/Drosophila_2.chip +G4110A G4110A /data/genomes/gsea/3.1/G4110A.chip +G4110Av2 G4110Av2 /data/genomes/gsea/3.1/G4110Av2.chip +GENE_SYMBOL GENE_SYMBOL /data/genomes/gsea/3.1/GENE_SYMBOL.chip +GenosysCytokineV2 GenosysCytokineV2 /data/genomes/gsea/3.1/GenosysCytokineV2.chip +HC_G110 HC_G110 /data/genomes/gsea/3.1/HC_G110.chip +HG_Focus HG_Focus /data/genomes/gsea/3.1/HG_Focus.chip +HG_U133A HG_U133A /data/genomes/gsea/3.1/HG_U133A.chip +HG_U133AAOFAV2 HG_U133AAOFAV2 /data/genomes/gsea/3.1/HG_U133AAOFAV2.chip +HG_U133A_2 HG_U133A_2 /data/genomes/gsea/3.1/HG_U133A_2.chip +HG_U133B HG_U133B /data/genomes/gsea/3.1/HG_U133B.chip +HG_U133_Plus_2 HG_U133_Plus_2 /data/genomes/gsea/3.1/HG_U133_Plus_2.chip +HG_U95Av2 HG_U95Av2 /data/genomes/gsea/3.1/HG_U95Av2.chip +HG_U95B HG_U95B /data/genomes/gsea/3.1/HG_U95B.chip +HG_U95C HG_U95C /data/genomes/gsea/3.1/HG_U95C.chip +HG_U95D HG_U95D /data/genomes/gsea/3.1/HG_U95D.chip +HG_U95E HG_U95E /data/genomes/gsea/3.1/HG_U95E.chip +HPCGGCompugenAnnotations HPCGGCompugenAnnotations /data/genomes/gsea/3.1/HPCGGCompugenAnnotations.chip +HT_HG_U133A HT_HG_U133A /data/genomes/gsea/3.1/HT_HG_U133A.chip +HT_HG_U133A_EA HT_HG_U133A_EA /data/genomes/gsea/3.1/HT_HG_U133A_EA.chip +HU6800 HU6800 /data/genomes/gsea/3.1/HU6800.chip +Hu35KsubA Hu35KsubA /data/genomes/gsea/3.1/Hu35KsubA.chip +Hu35KsubB Hu35KsubB /data/genomes/gsea/3.1/Hu35KsubB.chip +Hu35KsubC Hu35KsubC /data/genomes/gsea/3.1/Hu35KsubC.chip +Hu35KsubD Hu35KsubD /data/genomes/gsea/3.1/Hu35KsubD.chip +HuEx_1_0_STv2 HuEx_1_0_STv2 /data/genomes/gsea/3.1/HuEx_1_0_STv2.chip +HuGene_1_0_st HuGene_1_0_st /data/genomes/gsea/3.1/HuGene_1_0_st.chip +Illimina_Mus6_v1_1 Illimina_Mus6_v1_1 /data/genomes/gsea/3.1/Illimina_Mus6_v1_1.chip +Illimuna_Mus6_v1 Illimuna_Mus6_v1 /data/genomes/gsea/3.1/Illimuna_Mus6_v1.chip +Illumina_Hum6_v1 Illumina_Hum6_v1 /data/genomes/gsea/3.1/Illumina_Hum6_v1.chip +Illumina_Hum6_v2 Illumina_Hum6_v2 /data/genomes/gsea/3.1/Illumina_Hum6_v2.chip +Illumina_HumRef8_v1 Illumina_HumRef8_v1 /data/genomes/gsea/3.1/Illumina_HumRef8_v1.chip +Illumina_HumRef8_v2 Illumina_HumRef8_v2 /data/genomes/gsea/3.1/Illumina_HumRef8_v2.chip +Illumina_Human Illumina_Human /data/genomes/gsea/3.1/Illumina_Human.chip +Illumina_Mus6_v2 Illumina_Mus6_v2 /data/genomes/gsea/3.1/Illumina_Mus6_v2.chip +Illumina_MusRef8_v1 Illumina_MusRef8_v1 /data/genomes/gsea/3.1/Illumina_MusRef8_v1.chip +Illumina_MusRef8_v1_1 Illumina_MusRef8_v1_1 /data/genomes/gsea/3.1/Illumina_MusRef8_v1_1.chip +Illumina_RatRef12_v1 Illumina_RatRef12_v1 /data/genomes/gsea/3.1/Illumina_RatRef12_v1.chip +MG_U74Av2 MG_U74Av2 /data/genomes/gsea/3.1/MG_U74Av2.chip +MG_U74Bv2 MG_U74Bv2 /data/genomes/gsea/3.1/MG_U74Bv2.chip +MG_U74Cv2 MG_U74Cv2 /data/genomes/gsea/3.1/MG_U74Cv2.chip +MOE430A MOE430A /data/genomes/gsea/3.1/MOE430A.chip +MOE430B MOE430B /data/genomes/gsea/3.1/MOE430B.chip +MWG_Human_30K_A MWG_Human_30K_A /data/genomes/gsea/3.1/MWG_Human_30K_A.chip +MWG_Human_30K_B MWG_Human_30K_B /data/genomes/gsea/3.1/MWG_Human_30K_B.chip +MoEx_1_0_st MoEx_1_0_st /data/genomes/gsea/3.1/MoEx_1_0_st.chip +MoGene_1_0_st MoGene_1_0_st /data/genomes/gsea/3.1/MoGene_1_0_st.chip +MoGene_1_1_st MoGene_1_1_st /data/genomes/gsea/3.1/MoGene_1_1_st.chip +Mouse430A_2 Mouse430A_2 /data/genomes/gsea/3.1/Mouse430A_2.chip +Mouse430_2 Mouse430_2 /data/genomes/gsea/3.1/Mouse430_2.chip +MouseHsHomolSym MouseHsHomolSym /data/genomes/gsea/3.1/mm_hs_homologene.chip +MouseHsJaxSym MouseHsJaxSym /data/genomes/gsea/3.1/mm_hs_orthologues.chip +Mu11KsubA Mu11KsubA /data/genomes/gsea/3.1/Mu11KsubA.chip +Mu11KsubB Mu11KsubB /data/genomes/gsea/3.1/Mu11KsubB.chip +Mu19KsubA Mu19KsubA /data/genomes/gsea/3.1/Mu19KsubA.chip +Mu19KsubB Mu19KsubB /data/genomes/gsea/3.1/Mu19KsubB.chip +Mu19KsubC Mu19KsubC /data/genomes/gsea/3.1/Mu19KsubC.chip +NIA15k NIA15k /data/genomes/gsea/3.1/NIA15k.chip +Netherland_cancer_institute_operon_human_35k Netherland_cancer_institute_operon_human_35k /data/genomes/gsea/3.1/Netherland_cancer_institute_operon_human_35k.chip +Netherland_cancer_institute_operon_mouse_FOOk Netherland_cancer_institute_operon_mouse_FOOk /data/genomes/gsea/3.1/Netherland_cancer_institute_operon_mouse_FOOk.chip +OPERON_HUMANv2 OPERON_HUMANv2 /data/genomes/gsea/3.1/OPERON_HUMANv2.chip +OPERON_HUMANv3 OPERON_HUMANv3 /data/genomes/gsea/3.1/OPERON_HUMANv3.chip +Ortholog_SEQ_ACCESSION_MOUSE Ortholog_SEQ_ACCESSION_MOUSE /data/genomes/gsea/3.1/Ortholog_SEQ_ACCESSION_MOUSE.chip +RAE230A RAE230A /data/genomes/gsea/3.1/RAE230A.chip +RAE230B RAE230B /data/genomes/gsea/3.1/RAE230B.chip +RG_U34A RG_U34A /data/genomes/gsea/3.1/RG_U34A.chip +RG_U34B RG_U34B /data/genomes/gsea/3.1/RG_U34B.chip +RG_U34C RG_U34C /data/genomes/gsea/3.1/RG_U34C.chip +RN_U34 RN_U34 /data/genomes/gsea/3.1/RN_U34.chip +RT_U34 RT_U34 /data/genomes/gsea/3.1/RT_U34.chip +RZPD_Human_Ensembl1.1 RZPD_Human_Ensembl1.1 /data/genomes/gsea/3.1/RZPD_Human_Ensembl1.1.chip +RZPD_Human_ORF_Clones_Gateway RZPD_Human_ORF_Clones_Gateway /data/genomes/gsea/3.1/RZPD_Human_ORF_Clones_Gateway.chip +RZPD_Human_Unigene3.1 RZPD_Human_Unigene3.1 /data/genomes/gsea/3.1/RZPD_Human_Unigene3.1.chip +Rat230_2 Rat230_2 /data/genomes/gsea/3.1/Rat230_2.chip +RatHsHomolSym RatHsHomolSym /data/genomes/gsea/3.1/rn_hs_homologene.chip +RefSeq_NP_Human RefSeq_NP_Human /data/genomes/gsea/3.1/RefSeq_NP_Human.chip +RefSeq_NP_Mouse RefSeq_NP_Mouse /data/genomes/gsea/3.1/RefSeq_NP_Mouse.chip +RefSeq_NP_Rat RefSeq_NP_Rat /data/genomes/gsea/3.1/RefSeq_NP_Rat.chip +RefSeq_human RefSeq_human /data/genomes/gsea/3.1/RefSeq_human.chip +Research_Genetics Research_Genetics /data/genomes/gsea/3.1/Research_Genetics.chip +Rosetta Rosetta /data/genomes/gsea/3.1/Rosetta.chip +Rosetta50K Rosetta50K /data/genomes/gsea/3.1/Rosetta50K.chip +Seq_Accession Seq_Accession /data/genomes/gsea/3.1/Seq_Accession.chip +Stanford Stanford /data/genomes/gsea/3.1/Stanford.chip +Stanford_Source_Accessions Stanford_Source_Accessions /data/genomes/gsea/3.1/Stanford_Source_Accessions.chip +TIGR_31K_Human_Set TIGR_31K_Human_Set /data/genomes/gsea/3.1/TIGR_31K_Human_Set.chip +TIGR_40K_Human_Set TIGR_40K_Human_Set /data/genomes/gsea/3.1/TIGR_40K_Human_Set.chip +TRC TRC /data/genomes/gsea/3.1/TRC.chip +TRC_DB TRC_DB /data/genomes/gsea/3.1/TRC_DB.chip +TRC_DB_v1 TRC_DB_v1 /data/genomes/gsea/3.1/TRC_DB_v1.chip +U133_X3P U133_X3P /data/genomes/gsea/3.1/U133_X3P.chip +UCLA_NIH_33K UCLA_NIH_33K /data/genomes/gsea/3.1/UCLA_NIH_33K.chip +Zebrafish Zebrafish /data/genomes/gsea/3.1/Zebrafish.chip +ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL /data/genomes/gsea/3.1/ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL.chip +ilmn_HumanHT_12_V3_0_R3_11283641_A ilmn_HumanHT_12_V3_0_R3_11283641_A /data/genomes/gsea/3.1/ilmn_HumanHT_12_V3_0_R3_11283641_A.chip +ilmn_HumanHT_12_V4_0_R1_15002873_B ilmn_HumanHT_12_V4_0_R1_15002873_B /data/genomes/gsea/3.1/ilmn_HumanHT_12_V4_0_R1_15002873_B.chip +ilmn_HumanRef_8_V2_0_R4_11223162_A ilmn_HumanRef_8_V2_0_R4_11223162_A /data/genomes/gsea/3.1/ilmn_HumanRef_8_V2_0_R4_11223162_A.chip +ilmn_HumanRef_8_V3_0_R3_11282963_A ilmn_HumanRef_8_V3_0_R3_11282963_A /data/genomes/gsea/3.1/ilmn_HumanRef_8_V3_0_R3_11282963_A.chip +ilmn_HumanWG_6_V2_0_R4_11223189_A ilmn_HumanWG_6_V2_0_R4_11223189_A /data/genomes/gsea/3.1/ilmn_HumanWG_6_V2_0_R4_11223189_A.chip +ilmn_HumanWG_6_V3_0_R3_11282955_A ilmn_HumanWG_6_V3_0_R3_11282955_A /data/genomes/gsea/3.1/ilmn_HumanWG_6_V3_0_R3_11282955_A.chip +ilmn_MouseRef_8_V1_1_R4_11234312_A ilmn_MouseRef_8_V1_1_R4_11234312_A /data/genomes/gsea/3.1/ilmn_MouseRef_8_V1_1_R4_11234312_A.chip +ilmn_MouseRef_8_V2_0_R3_11278551_A ilmn_MouseRef_8_V2_0_R3_11278551_A /data/genomes/gsea/3.1/ilmn_MouseRef_8_V2_0_R3_11278551_A.chip +ilmn_MouseWG_6_V1_1_R4_11234304_A ilmn_MouseWG_6_V1_1_R4_11234304_A /data/genomes/gsea/3.1/ilmn_MouseWG_6_V1_1_R4_11234304_A.chip +ilmn_MouseWG_6_V2_0_R3_11278593_A ilmn_MouseWG_6_V2_0_R3_11278593_A /data/genomes/gsea/3.1/ilmn_MouseWG_6_V2_0_R3_11278593_A.chip +ilmn_RatRef_12_V1_0_R5_11222119_A ilmn_RatRef_12_V1_0_R5_11222119_A /data/genomes/gsea/3.1/ilmn_RatRef_12_V1_0_R5_11222119_A.chip +labonweb_human labonweb_human /data/genomes/gsea/3.1/labonweb_human.chip +lymphochip lymphochip /data/genomes/gsea/3.1/lymphochip.chip