Mercurial > repos > fubar > rg_gsea

annotate rgGSEA/gseaChip_3.1_symbols.loc.sample @ 2:71fa159646c9 draft

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author fubar
date Sun, 09 Jun 2013 02:01:13 -0400
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1 # generated by makeGSEAloc.py at 24/01/2013 10:43:16 from path = /data/genomes/gsea/3.1
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2 # loc file for the rgGSEA tool pointing to files from ftp://gseaftp.broadinstitute.org/pub/gsea/annotations
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3 # name value path
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4 AFFYMETRIX AFFYMETRIX /data/genomes/gsea/3.1/AFFYMETRIX.chip
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5 AG AG /data/genomes/gsea/3.1/AG.chip
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6 APPLERA_ABI1700 APPLERA_ABI1700 /data/genomes/gsea/3.1/APPLERA_ABI1700.chip
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7 ATH1_121501 ATH1_121501 /data/genomes/gsea/3.1/ATH1_121501.chip
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8 Agilent_Human1A Agilent_Human1A /data/genomes/gsea/3.1/Agilent_Human1A.chip
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9 Agilent_Human1Av2 Agilent_Human1Av2 /data/genomes/gsea/3.1/Agilent_Human1Av2.chip
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10 Agilent_Human1B Agilent_Human1B /data/genomes/gsea/3.1/Agilent_Human1B.chip
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11 Agilent_Human1_cDNA Agilent_Human1_cDNA /data/genomes/gsea/3.1/Agilent_Human1_cDNA.chip
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12 Agilent_HumanGenome Agilent_HumanGenome /data/genomes/gsea/3.1/Agilent_HumanGenome.chip
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13 Agilent_MouseDev Agilent_MouseDev /data/genomes/gsea/3.1/Agilent_MouseDev.chip
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14 Agilent_MouseGenome Agilent_MouseGenome /data/genomes/gsea/3.1/Agilent_MouseGenome.chip
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15 Agilent_MouseOligo Agilent_MouseOligo /data/genomes/gsea/3.1/Agilent_MouseOligo.chip
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16 Agilent_Mouse_cDNA Agilent_Mouse_cDNA /data/genomes/gsea/3.1/Agilent_Mouse_cDNA.chip
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17 Agilent_RatGenome_G4131A Agilent_RatGenome_G4131A /data/genomes/gsea/3.1/Agilent_RatGenome_G4131A.chip
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18 Agilent_RatOligo Agilent_RatOligo /data/genomes/gsea/3.1/Agilent_RatOligo.chip
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19 AtlasMouse1.2 AtlasMouse1.2 /data/genomes/gsea/3.1/AtlasMouse1.2.chip
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20 AtlasRat1.2 AtlasRat1.2 /data/genomes/gsea/3.1/AtlasRat1.2.chip
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21 BIAO BIAO /data/genomes/gsea/3.1/BIAO.chip
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22 Bovine Bovine /data/genomes/gsea/3.1/Bovine.chip
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23 CNMCMuscleChip CNMCMuscleChip /data/genomes/gsea/3.1/CNMCMuscleChip.chip
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24 Caltech16KMouse Caltech16KMouse /data/genomes/gsea/3.1/Caltech16KMouse.chip
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25 Caltech16KOligoMouse Caltech16KOligoMouse /data/genomes/gsea/3.1/Caltech16KOligoMouse.chip
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26 Canine_2 Canine_2 /data/genomes/gsea/3.1/Canine_2.chip
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27 Clontech_Atlas_13K Clontech_Atlas_13K /data/genomes/gsea/3.1/Clontech_Atlas_13K.chip
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28 Clontech_BD_Atlas Clontech_BD_Atlas /data/genomes/gsea/3.1/Clontech_BD_Atlas.chip
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29 CodeLink_Human_Whole_Genome CodeLink_Human_Whole_Genome /data/genomes/gsea/3.1/CodeLink_Human_Whole_Genome.chip
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30 CodeLink_UniSet_Human_20K_I_Bioarray CodeLink_UniSet_Human_20K_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_20K_I_Bioarray.chip
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31 CodeLink_UniSet_Human_II_Bioarray CodeLink_UniSet_Human_II_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_II_Bioarray.chip
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32 CodeLink_UniSet_Human_I_Bioarray CodeLink_UniSet_Human_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Human_I_Bioarray.chip
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33 CodeLink_UniSet_Rat_I_Bioarray CodeLink_UniSet_Rat_I_Bioarray /data/genomes/gsea/3.1/CodeLink_UniSet_Rat_I_Bioarray.chip
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34 DrosGenome1 DrosGenome1 /data/genomes/gsea/3.1/DrosGenome1.chip
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35 Drosophila_2 Drosophila_2 /data/genomes/gsea/3.1/Drosophila_2.chip
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36 G4110A G4110A /data/genomes/gsea/3.1/G4110A.chip
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37 G4110Av2 G4110Av2 /data/genomes/gsea/3.1/G4110Av2.chip
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38 GENE_SYMBOL GENE_SYMBOL /data/genomes/gsea/3.1/GENE_SYMBOL.chip
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39 GenosysCytokineV2 GenosysCytokineV2 /data/genomes/gsea/3.1/GenosysCytokineV2.chip
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40 HC_G110 HC_G110 /data/genomes/gsea/3.1/HC_G110.chip
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41 HG_Focus HG_Focus /data/genomes/gsea/3.1/HG_Focus.chip
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42 HG_U133A HG_U133A /data/genomes/gsea/3.1/HG_U133A.chip
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43 HG_U133AAOFAV2 HG_U133AAOFAV2 /data/genomes/gsea/3.1/HG_U133AAOFAV2.chip
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44 HG_U133A_2 HG_U133A_2 /data/genomes/gsea/3.1/HG_U133A_2.chip
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45 HG_U133B HG_U133B /data/genomes/gsea/3.1/HG_U133B.chip
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46 HG_U133_Plus_2 HG_U133_Plus_2 /data/genomes/gsea/3.1/HG_U133_Plus_2.chip
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47 HG_U95Av2 HG_U95Av2 /data/genomes/gsea/3.1/HG_U95Av2.chip
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48 HG_U95B HG_U95B /data/genomes/gsea/3.1/HG_U95B.chip
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49 HG_U95C HG_U95C /data/genomes/gsea/3.1/HG_U95C.chip
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50 HG_U95D HG_U95D /data/genomes/gsea/3.1/HG_U95D.chip
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51 HG_U95E HG_U95E /data/genomes/gsea/3.1/HG_U95E.chip
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52 HPCGGCompugenAnnotations HPCGGCompugenAnnotations /data/genomes/gsea/3.1/HPCGGCompugenAnnotations.chip
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53 HT_HG_U133A HT_HG_U133A /data/genomes/gsea/3.1/HT_HG_U133A.chip
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54 HT_HG_U133A_EA HT_HG_U133A_EA /data/genomes/gsea/3.1/HT_HG_U133A_EA.chip
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55 HU6800 HU6800 /data/genomes/gsea/3.1/HU6800.chip
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56 Hu35KsubA Hu35KsubA /data/genomes/gsea/3.1/Hu35KsubA.chip
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57 Hu35KsubB Hu35KsubB /data/genomes/gsea/3.1/Hu35KsubB.chip
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58 Hu35KsubC Hu35KsubC /data/genomes/gsea/3.1/Hu35KsubC.chip
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59 Hu35KsubD Hu35KsubD /data/genomes/gsea/3.1/Hu35KsubD.chip
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60 HuEx_1_0_STv2 HuEx_1_0_STv2 /data/genomes/gsea/3.1/HuEx_1_0_STv2.chip
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61 HuGene_1_0_st HuGene_1_0_st /data/genomes/gsea/3.1/HuGene_1_0_st.chip
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62 Illimina_Mus6_v1_1 Illimina_Mus6_v1_1 /data/genomes/gsea/3.1/Illimina_Mus6_v1_1.chip
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63 Illimuna_Mus6_v1 Illimuna_Mus6_v1 /data/genomes/gsea/3.1/Illimuna_Mus6_v1.chip
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64 Illumina_Hum6_v1 Illumina_Hum6_v1 /data/genomes/gsea/3.1/Illumina_Hum6_v1.chip
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65 Illumina_Hum6_v2 Illumina_Hum6_v2 /data/genomes/gsea/3.1/Illumina_Hum6_v2.chip
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66 Illumina_HumRef8_v1 Illumina_HumRef8_v1 /data/genomes/gsea/3.1/Illumina_HumRef8_v1.chip
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67 Illumina_HumRef8_v2 Illumina_HumRef8_v2 /data/genomes/gsea/3.1/Illumina_HumRef8_v2.chip
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68 Illumina_Human Illumina_Human /data/genomes/gsea/3.1/Illumina_Human.chip
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69 Illumina_Mus6_v2 Illumina_Mus6_v2 /data/genomes/gsea/3.1/Illumina_Mus6_v2.chip
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70 Illumina_MusRef8_v1 Illumina_MusRef8_v1 /data/genomes/gsea/3.1/Illumina_MusRef8_v1.chip
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71 Illumina_MusRef8_v1_1 Illumina_MusRef8_v1_1 /data/genomes/gsea/3.1/Illumina_MusRef8_v1_1.chip
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72 Illumina_RatRef12_v1 Illumina_RatRef12_v1 /data/genomes/gsea/3.1/Illumina_RatRef12_v1.chip
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73 MG_U74Av2 MG_U74Av2 /data/genomes/gsea/3.1/MG_U74Av2.chip
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74 MG_U74Bv2 MG_U74Bv2 /data/genomes/gsea/3.1/MG_U74Bv2.chip
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75 MG_U74Cv2 MG_U74Cv2 /data/genomes/gsea/3.1/MG_U74Cv2.chip
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76 MOE430A MOE430A /data/genomes/gsea/3.1/MOE430A.chip
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77 MOE430B MOE430B /data/genomes/gsea/3.1/MOE430B.chip
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78 MWG_Human_30K_A MWG_Human_30K_A /data/genomes/gsea/3.1/MWG_Human_30K_A.chip
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79 MWG_Human_30K_B MWG_Human_30K_B /data/genomes/gsea/3.1/MWG_Human_30K_B.chip
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80 MoEx_1_0_st MoEx_1_0_st /data/genomes/gsea/3.1/MoEx_1_0_st.chip
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81 MoGene_1_0_st MoGene_1_0_st /data/genomes/gsea/3.1/MoGene_1_0_st.chip
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82 MoGene_1_1_st MoGene_1_1_st /data/genomes/gsea/3.1/MoGene_1_1_st.chip
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83 Mouse430A_2 Mouse430A_2 /data/genomes/gsea/3.1/Mouse430A_2.chip
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84 Mouse430_2 Mouse430_2 /data/genomes/gsea/3.1/Mouse430_2.chip
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85 MouseHsHomolSym MouseHsHomolSym /data/genomes/gsea/3.1/mm_hs_homologene.chip
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86 MouseHsJaxSym MouseHsJaxSym /data/genomes/gsea/3.1/mm_hs_orthologues.chip
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87 Mu11KsubA Mu11KsubA /data/genomes/gsea/3.1/Mu11KsubA.chip
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88 Mu11KsubB Mu11KsubB /data/genomes/gsea/3.1/Mu11KsubB.chip
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89 Mu19KsubA Mu19KsubA /data/genomes/gsea/3.1/Mu19KsubA.chip
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90 Mu19KsubB Mu19KsubB /data/genomes/gsea/3.1/Mu19KsubB.chip
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91 Mu19KsubC Mu19KsubC /data/genomes/gsea/3.1/Mu19KsubC.chip
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92 NIA15k NIA15k /data/genomes/gsea/3.1/NIA15k.chip
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93 Netherland_cancer_institute_operon_human_35k Netherland_cancer_institute_operon_human_35k /data/genomes/gsea/3.1/Netherland_cancer_institute_operon_human_35k.chip
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94 Netherland_cancer_institute_operon_mouse_FOOk Netherland_cancer_institute_operon_mouse_FOOk /data/genomes/gsea/3.1/Netherland_cancer_institute_operon_mouse_FOOk.chip
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95 OPERON_HUMANv2 OPERON_HUMANv2 /data/genomes/gsea/3.1/OPERON_HUMANv2.chip
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96 OPERON_HUMANv3 OPERON_HUMANv3 /data/genomes/gsea/3.1/OPERON_HUMANv3.chip
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97 Ortholog_SEQ_ACCESSION_MOUSE Ortholog_SEQ_ACCESSION_MOUSE /data/genomes/gsea/3.1/Ortholog_SEQ_ACCESSION_MOUSE.chip
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98 RAE230A RAE230A /data/genomes/gsea/3.1/RAE230A.chip
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99 RAE230B RAE230B /data/genomes/gsea/3.1/RAE230B.chip
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100 RG_U34A RG_U34A /data/genomes/gsea/3.1/RG_U34A.chip
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101 RG_U34B RG_U34B /data/genomes/gsea/3.1/RG_U34B.chip
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102 RG_U34C RG_U34C /data/genomes/gsea/3.1/RG_U34C.chip
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103 RN_U34 RN_U34 /data/genomes/gsea/3.1/RN_U34.chip
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104 RT_U34 RT_U34 /data/genomes/gsea/3.1/RT_U34.chip
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105 RZPD_Human_Ensembl1.1 RZPD_Human_Ensembl1.1 /data/genomes/gsea/3.1/RZPD_Human_Ensembl1.1.chip
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106 RZPD_Human_ORF_Clones_Gateway RZPD_Human_ORF_Clones_Gateway /data/genomes/gsea/3.1/RZPD_Human_ORF_Clones_Gateway.chip
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107 RZPD_Human_Unigene3.1 RZPD_Human_Unigene3.1 /data/genomes/gsea/3.1/RZPD_Human_Unigene3.1.chip
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108 Rat230_2 Rat230_2 /data/genomes/gsea/3.1/Rat230_2.chip
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109 RatHsHomolSym RatHsHomolSym /data/genomes/gsea/3.1/rn_hs_homologene.chip
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110 RefSeq_NP_Human RefSeq_NP_Human /data/genomes/gsea/3.1/RefSeq_NP_Human.chip
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111 RefSeq_NP_Mouse RefSeq_NP_Mouse /data/genomes/gsea/3.1/RefSeq_NP_Mouse.chip
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112 RefSeq_NP_Rat RefSeq_NP_Rat /data/genomes/gsea/3.1/RefSeq_NP_Rat.chip
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113 RefSeq_human RefSeq_human /data/genomes/gsea/3.1/RefSeq_human.chip
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114 Research_Genetics Research_Genetics /data/genomes/gsea/3.1/Research_Genetics.chip
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115 Rosetta Rosetta /data/genomes/gsea/3.1/Rosetta.chip
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116 Rosetta50K Rosetta50K /data/genomes/gsea/3.1/Rosetta50K.chip
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117 Seq_Accession Seq_Accession /data/genomes/gsea/3.1/Seq_Accession.chip
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118 Stanford Stanford /data/genomes/gsea/3.1/Stanford.chip
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119 Stanford_Source_Accessions Stanford_Source_Accessions /data/genomes/gsea/3.1/Stanford_Source_Accessions.chip
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120 TIGR_31K_Human_Set TIGR_31K_Human_Set /data/genomes/gsea/3.1/TIGR_31K_Human_Set.chip
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121 TIGR_40K_Human_Set TIGR_40K_Human_Set /data/genomes/gsea/3.1/TIGR_40K_Human_Set.chip
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122 TRC TRC /data/genomes/gsea/3.1/TRC.chip
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123 TRC_DB TRC_DB /data/genomes/gsea/3.1/TRC_DB.chip
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124 TRC_DB_v1 TRC_DB_v1 /data/genomes/gsea/3.1/TRC_DB_v1.chip
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125 U133_X3P U133_X3P /data/genomes/gsea/3.1/U133_X3P.chip
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126 UCLA_NIH_33K UCLA_NIH_33K /data/genomes/gsea/3.1/UCLA_NIH_33K.chip
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127 Zebrafish Zebrafish /data/genomes/gsea/3.1/Zebrafish.chip
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128 ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL /data/genomes/gsea/3.1/ilmn_HUMANREF_8_V3_0_R1_11282963_A_WGDASL.chip
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129 ilmn_HumanHT_12_V3_0_R3_11283641_A ilmn_HumanHT_12_V3_0_R3_11283641_A /data/genomes/gsea/3.1/ilmn_HumanHT_12_V3_0_R3_11283641_A.chip
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130 ilmn_HumanHT_12_V4_0_R1_15002873_B ilmn_HumanHT_12_V4_0_R1_15002873_B /data/genomes/gsea/3.1/ilmn_HumanHT_12_V4_0_R1_15002873_B.chip
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131 ilmn_HumanRef_8_V2_0_R4_11223162_A ilmn_HumanRef_8_V2_0_R4_11223162_A /data/genomes/gsea/3.1/ilmn_HumanRef_8_V2_0_R4_11223162_A.chip
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132 ilmn_HumanRef_8_V3_0_R3_11282963_A ilmn_HumanRef_8_V3_0_R3_11282963_A /data/genomes/gsea/3.1/ilmn_HumanRef_8_V3_0_R3_11282963_A.chip
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133 ilmn_HumanWG_6_V2_0_R4_11223189_A ilmn_HumanWG_6_V2_0_R4_11223189_A /data/genomes/gsea/3.1/ilmn_HumanWG_6_V2_0_R4_11223189_A.chip
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134 ilmn_HumanWG_6_V3_0_R3_11282955_A ilmn_HumanWG_6_V3_0_R3_11282955_A /data/genomes/gsea/3.1/ilmn_HumanWG_6_V3_0_R3_11282955_A.chip
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135 ilmn_MouseRef_8_V1_1_R4_11234312_A ilmn_MouseRef_8_V1_1_R4_11234312_A /data/genomes/gsea/3.1/ilmn_MouseRef_8_V1_1_R4_11234312_A.chip
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136 ilmn_MouseRef_8_V2_0_R3_11278551_A ilmn_MouseRef_8_V2_0_R3_11278551_A /data/genomes/gsea/3.1/ilmn_MouseRef_8_V2_0_R3_11278551_A.chip
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parents:
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137 ilmn_MouseWG_6_V1_1_R4_11234304_A ilmn_MouseWG_6_V1_1_R4_11234304_A /data/genomes/gsea/3.1/ilmn_MouseWG_6_V1_1_R4_11234304_A.chip
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138 ilmn_MouseWG_6_V2_0_R3_11278593_A ilmn_MouseWG_6_V2_0_R3_11278593_A /data/genomes/gsea/3.1/ilmn_MouseWG_6_V2_0_R3_11278593_A.chip
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139 ilmn_RatRef_12_V1_0_R5_11222119_A ilmn_RatRef_12_V1_0_R5_11222119_A /data/genomes/gsea/3.1/ilmn_RatRef_12_V1_0_R5_11222119_A.chip
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140 labonweb_human labonweb_human /data/genomes/gsea/3.1/labonweb_human.chip
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141 lymphochip lymphochip /data/genomes/gsea/3.1/lymphochip.chip