Mercurial > repos > fubar > edger_test

changeset 33:bddbc76bce5d draft

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Uploaded
author fubar
date Wed, 12 Jun 2013 23:51:30 -0400
parents f18d9aedcf58
children 0e69aefbbfa4
files rgedgeR/tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/rgedgeR/tool_dependencies.xml	Wed Jun 12 23:36:20 2013 -0400
+++ b/rgedgeR/tool_dependencies.xml	Wed Jun 12 23:51:30 2013 -0400
@@ -11,7 +11,7 @@
                         <package name="r3" version="3.0.1" />
                     </repository>
                 </action>
-                <action type="shell_command">R CMD BATCH installBioC.R </action>
+                <action type="shell_command">R CMD BATCH $INSTALL_DIR/installBioC.R </action>
             </actions>
         </install>
         <readme>Installs some basic bioc packages for the edgeR tool