Mercurial > repos > fcaramia > somatic_sniper
changeset 10:6d709235e747 draft
Uploaded
author | fcaramia |
---|---|
date | Wed, 19 Jun 2013 03:32:21 -0400 |
parents | e54d338a2842 |
children | 8376b0ec2bdd |
files | tool_dependencies.xml |
diffstat | 1 files changed, 2 insertions(+), 1 deletions(-) [+] |
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--- a/tool_dependencies.xml Wed Jun 19 03:27:10 2013 -0400 +++ b/tool_dependencies.xml Wed Jun 19 03:32:21 2013 -0400 @@ -27,8 +27,9 @@ <action type="download_file">https://github.com/genome/somatic-sniper/archive/master.zip</action> <action type="download_file">https://github.com/genome/build-common/tarball/master</action> <action type="shell_command">unzip master.zip</action> - <action type="shell_command">tar -xzf master</action> + <action type="shell_command">tar -xzfv master</action> <action type="shell_command">rm -rf somatic-sniper-master/build-common</action> + <action type="shell_command">echo $SAMTOOLS_PATH</action> <action type="move_directory_files"> <source_directory>genome-build-common-077bd57</source_directory> <destination_directory>somatic-sniper-master/build-common</destination_directory>