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3
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1 all:
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2
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3 test:
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4 $(MAKE) -C $@
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5
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6 planemo-venv/bin/planemo: planemo-venv
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7 . planemo-venv/bin/activate && pip install --upgrade pip setuptools
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8 . planemo-venv/bin/activate && pip install planemo
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9
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10 planemo-venv:
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11 virtualenv planemo-venv
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12
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13 planemolint: planemo-venv/bin/planemo
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14 . planemo-venv/bin/activate && planemo lint --no_xsd
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15
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16 planemotest: R_LIBS_USER=
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17 planemotest: planemo-venv/bin/planemo
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18 . planemo-venv/bin/activate && planemo test --conda_dependency_resolution --galaxy_branch release_17.09 2>&1 | tee planemotest.log
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19
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20 planemo-testtoolshed-diff: distplanemo-venv/bin/planemo
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21 . planemo-venv/bin/activate && cd $< && planemo shed_diff --shed_target testtoolshed
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22
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23 planemo-testtoolshed-update: distplanemo-venv/bin/planemo
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24 . planemo-venv/bin/activate && cd $< && planemo shed_update --check_diff --shed_target testtoolshed
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25
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26 planemo-toolshed-diff: distplanemo-venv/bin/planemo
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27 . planemo-venv/bin/activate && cd $< && planemo shed_diff --shed_target toolshed
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28
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29 planemo-toolshed-update: distplanemo-venv/bin/planemo
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30 . planemo-venv/bin/activate && cd $< && planemo shed_update --check_diff --shed_target toolshed
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31
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32 clean:
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33 $(MAKE) -C test $@
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34 $(RM) -r planemo-venv
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35 $(RM) -r planemotest.log
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36
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37 .PHONY: all clean test planemolint planemotest planemon-install planemo-toolshed-diff planemo-toolshed-update planemo-testtoolshed-diff planemo-testtoolshed-update testvenv
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