Mercurial > repos > estrain > ganon

changeset 18:0dab43404e51 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author estrain
date Mon, 08 Jul 2019 10:29:01 -0400
parents a95774fab536
children
files ganon.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/ganon.xml	Sun Jul 07 22:17:02 2019 -0400
+++ b/ganon.xml	Mon Jul 08 10:29:01 2019 -0400
@@ -77,9 +77,9 @@
         -o results;
 
         #if $options.select == "advanced"
-          python $__tool_directory__/scoreGanon.py -t results.tre -f $fname -o score.tab -r $options.k -n $options.n
+          python $__tool_directory__/scoreGanon.py -t results.tre -f "$fname" -o score.tab -r $options.k -n $options.n
         #else  
-          python $__tool_directory__/scoreGanon.py -t results.tre -f $fname -o score.tab -r "genus species" -n 2
+          python $__tool_directory__/scoreGanon.py -t results.tre -f "$fname" -o score.tab -r "genus species" -n 2
         #end if
 
     ]]></command>