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1 <tool id="ganon_data_manager" name="ganon data manager" version="0.0.1" tool_type="manage_data">
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2 <description>Create entry for ganon databases</description>
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3 <requirements>
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4 </requirements>
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5 <command detect_errors="exit_code"><![CDATA[
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6 python $__tool_directory__/add_table.py --rrna $rrna --output_directory $out_dir;
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7 ]]></command>
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8 <inputs>
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9 <param argument="rrna" type="select" label="Bacterial rRNA loci">
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10 <option value="5S">5S</option>
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11 <option value="16S">16S</option>
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12 <option value="23S">23S</option>
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13 </param>
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14 <param argument="out_dir" type="text" label="Output folder" value="/tool-data/ganon"/>
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15 </inputs>
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16 <outputs>
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17 <data name="output_file" format="data_manager_json"/>
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18 </outputs>
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19 <help><![CDATA[
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20 Create entry for ganon databases in data table
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21 ]]>
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22 </help>
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23 <citations>
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24 </citations>
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25 </tool>
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