Mercurial > repos > estrain > data_manager_amrfinderplus

changeset 20:54a1ba82521d draft

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Uploaded
author estrain
date Sun, 22 May 2022 23:50:19 +0000
parents c5d56f2f6e07
children 15cc3a5b3764
files data_manager_conf.xml
diffstat 1 files changed, 19 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Sun May 22 23:50:19 2022 +0000
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/data_manager_amrfinderplus.xml" id="data_manager_amrfinderplus">
+      <data_table name="amrfinderplus">
+        <output>
+          <column name="value" />
+          <column name="name" />
+          <column name="path" output_ref="output_file" >
+            <move type="directory" relativize_symlinks="True">
+              <src>${path}</src>
+              <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">amrfinderplus/</target>
+            </move>
+            <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/amrfinderplus/#echo str($name)#</value_translation>
+            <value_translation type="function">abspath</value_translation>
+          </column>
+        </output>
+      </data_table>
+    </data_manager>
+</data_managers>