Mercurial > repos > eschen42 > mqppep_anova
annotate macros.xml @ 31:c33c30398908 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 7e8b616a2519c8faeb6fd743a8fb73f271f655f9
author | eschen42 |
---|---|
date | Fri, 09 Dec 2022 21:05:54 +0000 |
parents | 2e35f925c469 |
children | f61fa0dd6b06 |
rev | line source |
---|---|
0
c1403d18c189
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit bb6c941be50db4c0719efdeaa904d7cb7aa1d182"
eschen42
parents:
diff
changeset
|
1 <macros> |
31
c33c30398908
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 7e8b616a2519c8faeb6fd743a8fb73f271f655f9
eschen42
parents:
27
diff
changeset
|
2 <token name="@TOOL_VERSION@">0.1.16</token> |
0
c1403d18c189
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit bb6c941be50db4c0719efdeaa904d7cb7aa1d182"
eschen42
parents:
diff
changeset
|
3 <token name="@VERSION_SUFFIX@">0</token> |
7
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
4 <xml name="requirements"> |
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
5 <requirements> |
17
bb38aac026b9
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit aea9ac5a98069c3c993bd7903eda732f8ae2109d"
eschen42
parents:
16
diff
changeset
|
6 <requirement type="package" version="1.56.0" >bioconductor-preprocesscore</requirement> |
27
2e35f925c469
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit be6750cb1d7ae18e71b60ae6f2c55e5331105c4f
eschen42
parents:
26
diff
changeset
|
7 <requirement type="package" version="6.2.1" >gmp</requirement> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
8 <requirement type="package" version="1.23.4" >numpy</requirement> |
17
bb38aac026b9
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit aea9ac5a98069c3c993bd7903eda732f8ae2109d"
eschen42
parents:
16
diff
changeset
|
9 <requirement type="package" version="0.3.3" >openblas</requirement> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
10 <requirement type="package" version="1.5.1" >pandas</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
11 <requirement type="package" version="1.70" >perl-dbd-sqlite</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
12 <requirement type="package" version="5.32.1" >perl</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
13 <requirement type="package" version="1.4.4" >pyahocorasick</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
14 <requirement type="package" version="3.10.6" >python</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
15 <requirement type="package" version="4.1.3" >r-base</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
16 <requirement type="package" version="6.0_93" >r-caret</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
17 <requirement type="package" version="1.14.4" >r-data.table</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
18 <requirement type="package" version="1.1.3" >r-dbi</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
19 <requirement type="package" version="3.3.6" >r-ggplot2</requirement> |
22
61adb8801b73
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 0c7ca054e77e042c8a584c9903073da064df7d8b
eschen42
parents:
21
diff
changeset
|
20 <requirement type="package" version="3.1.3" >r-gplots</requirement> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
21 <requirement type="package" version="0.9.5" >r-latex2exp</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
22 <requirement type="package" version="1.7.3" >r-optparse</requirement> |
22
61adb8801b73
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 0c7ca054e77e042c8a584c9903073da064df7d8b
eschen42
parents:
21
diff
changeset
|
23 <requirement type="package" version="1.4.4" >r-reshape2</requirement> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
24 <requirement type="package" version="2.17" >r-rmarkdown</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
25 <!-- |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
26 <requirement type="package" version="2.2.18" >r-rsqlite</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
27 <requirement type="package" version="0.4.2" >r-sass</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
28 --> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
29 <requirement type="package" version="1.2.2" >r-sessioninfo</requirement> |
22
61adb8801b73
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 0c7ca054e77e042c8a584c9903073da064df7d8b
eschen42
parents:
21
diff
changeset
|
30 <requirement type="package" version="0.4_11" >r-sqldf</requirement> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
31 <requirement type="package" version="1.4.1" >r-stringr</requirement> |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
32 <requirement type="package" version="0.42" >r-tinytex</requirement> |
17
bb38aac026b9
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit aea9ac5a98069c3c993bd7903eda732f8ae2109d"
eschen42
parents:
16
diff
changeset
|
33 <requirement type="package" version="0.3.7" >r-vioplot</requirement> |
7
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
34 <!-- |
15
2c5f1a2fe16a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 96659062ea07ac43d139746b0d119f1ee020f9cd"
eschen42
parents:
14
diff
changeset
|
35 It would be nice to use conda-forge/texlive-core rather than r-tinytex because the |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
36 former installs texlive when the package is built, but issue 19/61 blocked PDF-creation. |
15
2c5f1a2fe16a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 96659062ea07ac43d139746b0d119f1ee020f9cd"
eschen42
parents:
14
diff
changeset
|
37 Also, texlive-core also gave pango font errors (output had missing symbols replaced |
2c5f1a2fe16a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 96659062ea07ac43d139746b0d119f1ee020f9cd"
eschen42
parents:
14
diff
changeset
|
38 with boxes) unless I specified the build as well as the version when building a |
2c5f1a2fe16a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 96659062ea07ac43d139746b0d119f1ee020f9cd"
eschen42
parents:
14
diff
changeset
|
39 conda environment, e.g.: texlive-core=20210325=h97429d4_0 |
7
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
40 --> |
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
41 </requirements> |
26
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
42 <!-- I specified the versions above because it takes a VERY long time |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
43 to search for package versions when they are not omitted; also, |
5b8e15b2a67c
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit e0b80550743f634282b4b4348b75e6f172dc1488
eschen42
parents:
25
diff
changeset
|
44 locking version numbers might lead to more-reproducible behavior. |
22
61adb8801b73
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 0c7ca054e77e042c8a584c9903073da064df7d8b
eschen42
parents:
21
diff
changeset
|
45 --> |
7
d728198f1ba5
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 9a0fa6d0f9aadc069a5551a54da6daf307885637"
eschen42
parents:
0
diff
changeset
|
46 </xml> |
0
c1403d18c189
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit bb6c941be50db4c0719efdeaa904d7cb7aa1d182"
eschen42
parents:
diff
changeset
|
47 </macros> |