Mercurial > repos > erinija > dnp_compute_composite

annotate plot_selected.sh @ 0:92b1f9bacad7 draft default tip

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"planemo upload commit 1a32efb8343938e8d49190003f251c78b5a58225-dirty"
author erinija
date Fri, 01 May 2020 12:12:16 +0000
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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92b1f9bacad7 "planemo upload commit 1a32efb8343938e8d49190003f251c78b5a58225-dirty"
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1 #!/bin/sh
92b1f9bacad7 "planemo upload commit 1a32efb8343938e8d49190003f251c78b5a58225-dirty"
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2
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3 input=$1
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4 output=$2
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5 title=$3
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6 # columns should be separated by , : 1,2,4,5
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7 columns=$4
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8
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9 cut -f${columns} ${input} > input.tmp
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11 # calculate numberof columns
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12 cnum=`head -n1 input.tmp | tr "\t" "\n" | wc | awk '{print $1}'`
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14 # plot the data with gnuplot in one line
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15 gnuplot -e "set key outside; set terminal png; set output '${output}'; set title '${title}'; plot for [col=1:'${cnum}'] 'input.tmp' using 0:col with lines title columnheader;"
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92b1f9bacad7 "planemo upload commit 1a32efb8343938e8d49190003f251c78b5a58225-dirty"
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17 rm input.tmp