Mercurial > repos > eric-rasche > apollo
diff export.py @ 7:f9a6e151b3b4 draft
planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 52b9e5bf6a6efb09a5cb845ee48703651c644174
author | eric-rasche |
---|---|
date | Tue, 27 Jun 2017 04:05:17 -0400 |
parents | 7610987e0c48 |
children |
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--- a/export.py Sat Mar 04 18:00:52 2017 -0500 +++ b/export.py Tue Jun 27 04:05:17 2017 -0400 @@ -1,16 +1,18 @@ #!/usr/bin/env python +from __future__ import print_function +import argparse +import json import sys +from Bio import SeqIO +from BCBio import GFF +from webapollo import WAAuth, WebApolloInstance, CnOrGuess, GuessCn +from future import standard_library +standard_library.install_aliases() try: import StringIO as io except ImportError: import io -import json -import argparse -from Bio import SeqIO -from BCBio import GFF -from webapollo import WAAuth, WebApolloInstance, CnOrGuess, GuessCn - def export(org_cn, seqs): org_data = wa.organisms.findOrganismByCn(org_cn)