comparison export.py @ 7:f9a6e151b3b4 draft

planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 52b9e5bf6a6efb09a5cb845ee48703651c644174
author eric-rasche
date Tue, 27 Jun 2017 04:05:17 -0400
parents 7610987e0c48
children
comparison
equal deleted inserted replaced
6:8f76685cdfc8 7:f9a6e151b3b4
1 #!/usr/bin/env python 1 #!/usr/bin/env python
2 from __future__ import print_function
3 import argparse
4 import json
2 import sys 5 import sys
6 from Bio import SeqIO
7 from BCBio import GFF
8 from webapollo import WAAuth, WebApolloInstance, CnOrGuess, GuessCn
9 from future import standard_library
10 standard_library.install_aliases()
3 try: 11 try:
4 import StringIO as io 12 import StringIO as io
5 except ImportError: 13 except ImportError:
6 import io 14 import io
7
8 import json
9 import argparse
10 from Bio import SeqIO
11 from BCBio import GFF
12 from webapollo import WAAuth, WebApolloInstance, CnOrGuess, GuessCn
13 15
14 16
15 def export(org_cn, seqs): 17 def export(org_cn, seqs):
16 org_data = wa.organisms.findOrganismByCn(org_cn) 18 org_data = wa.organisms.findOrganismByCn(org_cn)
17 19