diff macros.xml @ 5:7610987e0c48 draft

planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 29795b77c0d5c7894219b018a92c5ee7818096c3

--- a/macros.xml	Thu Jan 12 11:53:44 2017 -0500
+++ b/macros.xml	Wed Mar 01 22:39:58 2017 -0500
@@ -5,6 +5,7 @@
       <requirement type="package" version="2.7">python</requirement>
       <requirement type="package" version="1.65">biopython</requirement>
       <requirement type="package" version="0.6.2">bcbiogff</requirement>
+      <requirement type="package" version="2.12.4">requests</requirement>
       <yield/>
     </requirements>
   </xml>
@@ -15,12 +16,6 @@
   <token name="@URL@">
 \$GALAXY_WEBAPOLLO_URL
   </token>
-  <token name="@USER_AUTH_REMOTE@">
-\$GALAXY_WEBAPOLLO_URL
-$__user_email__
-""
---remote_user REMOTE_USER
-  </token>
   <token name="@ADMIN_AUTH@">
 \$GALAXY_WEBAPOLLO_URL
 \$GALAXY_WEBAPOLLO_USER
@@ -67,7 +62,7 @@
             <param name="org_select" type="select" dynamic_options="galaxy_list_orgs(__trans__)" label="Organism" />
         </when>
         <when value="direct">
-            <param name="org_raw" type="text" label="Organism Common Name" />
+            <param name="org_raw" type="text" label="Organism Common Name" optional="False" />
         </when>
         <when value="auto_json">
             <param name="org_file" type="data" format="json" label="Apollo Organism File" help="Will only fetch first organism" />