Mercurial > repos > eric-rasche > apollo
comparison json2iframe.py @ 7:f9a6e151b3b4 draft
planemo upload for repository https://github.com/TAMU-CPT/galaxy-webapollo commit 52b9e5bf6a6efb09a5cb845ee48703651c644174
| author | eric-rasche |
|---|---|
| date | Tue, 27 Jun 2017 04:05:17 -0400 |
| parents | 7610987e0c48 |
| children |
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| 6:8f76685cdfc8 | 7:f9a6e151b3b4 |
|---|---|
| 1 #!/usr/bin/env python | 1 #!/usr/bin/env python |
| 2 from __future__ import print_function | |
| 3 import argparse | |
| 2 import json | 4 import json |
| 3 import base64 | 5 |
| 4 import argparse | |
| 5 | 6 |
| 6 if __name__ == '__main__': | 7 if __name__ == '__main__': |
| 7 parser = argparse.ArgumentParser(description='Sample script to add an attribute to a feature via web services') | 8 parser = argparse.ArgumentParser(description='Sample script to add an attribute to a feature via web services') |
| 8 parser.add_argument('apollo', help='Complete Apollo URL') | 9 parser.add_argument('apollo', help='Complete Apollo URL') |
| 9 parser.add_argument('json', type=argparse.FileType("r"), help='JSON Data') | 10 parser.add_argument('json', type=argparse.FileType("r"), help='JSON Data') |
| 24 <body> | 25 <body> |
| 25 <iframe src="{base_url}/annotator/loadLink?loc={chrom}&organism={orgId}&tracklist=1"></iframe> | 26 <iframe src="{base_url}/annotator/loadLink?loc={chrom}&organism={orgId}&tracklist=1"></iframe> |
| 26 </body> | 27 </body> |
| 27 </html> | 28 </html> |
| 28 """ | 29 """ |
| 29 # HTML_TPL = base64.b64decode(HTML_TPL.replace('\n', '')) | |
| 30 | 30 |
| 31 print HTML_TPL.format(base_url=args.external_apollo_url, chrom="", orgId=data[0]['id']) | 31 print(HTML_TPL.format(base_url=args.external_apollo_url, chrom="", orgId=data[0]['id'])) |