Mercurial > repos > elixir-it > covacs_freebayes
view filter.fb.pl @ 1:cbe203c9bc3a draft default tip
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author | elixir-it |
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date | Thu, 15 Nov 2018 15:55:26 -0500 |
parents | 03593410f057 |
children |
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#!/usr/bin/perl -w # $f=shift; $out=shift; open(IN,$f); open(OUT,">$out"); while(<IN>) { if ($_=~/^#/) { print OUT; next; }else{ $vl=(split())[5]; $gt=(split())[-1]; $gt=(split(/\:/,$gt))[0]; next if $gt eq "0/0"; print OUT if $vl>20; } } close(OUT);