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comparison PredSi.xml @ 4:dda118a96cb0 draft

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planemo upload
author eduardo
date Fri, 30 Sep 2016 10:54:37 -0400
parents 640b18ca4e64
children f66c6b1a7930
comparison
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3:640b18ca4e64 4:dda118a96cb0
3 </requirements> 3 </requirements>
4 <stdio> 4 <stdio>
5 <exit_code range="1:" /> 5 <exit_code range="1:" />
6 </stdio> 6 </stdio>
7 <command><![CDATA[ 7 <command><![CDATA[
8 _JAVA_OPTIONS=\${_JAVA_OPTIONS:-'-Xmx2048m -Xms256m'} &amp;&amp; 8 _JAVA_OPTIONS=\${_JAVA_OPTIONS:-'-Xmx2048m -Xms256m'} && export _JAVA_OPTIONS && java -jar $__tool_directory__/JSPP.jar $__tool_directory__/tool-data/eukarya.smx $input1 $output1
9 export _JAVA_OPTIONS &amp;&amp;
10 java -jar $__tool_directory__/JSPP.jar $__tool_directory__/tool-data/eukarya.smx $input1 $output1
11 ]]></command> 9 ]]></command>
12 <inputs> 10 <inputs>
13 <param type="data" name="input1" format="fasta" label="Sequence Fasta"/> 11 <param type="data" name="input1" format="fasta" label="Sequence Fasta"/>
14 </inputs> 12 </inputs>
15 <outputs> 13 <outputs>