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5 <!-- Generated by javadoc on Fri Feb 13 17:31:23 CET 2004 -->
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6 <META http-equiv="Content-Type" content="text/html; charset=windows-1252">
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8 SearchMatrix
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10 <META NAME="keywords" CONTENT="jspp.SearchMatrix,SearchMatrix class">
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16 parent.document.title="SearchMatrix";
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17 }
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54 document.writeln('<A HREF="../allclasses-noframe.html" TARGET=""><B>All Classes</B></A>');
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65 SUMMARY: NESTED | FIELD | <A HREF="#constructor_summary">CONSTR</A> | <A HREF="#method_summary">METHOD</A></FONT></TD>
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67 DETAIL: FIELD | <A HREF="#constructor_detail">CONSTR</A> | <A HREF="#method_detail">METHOD</A></FONT></TD>
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72 <HR>
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73 <!-- ======== START OF CLASS DATA ======== -->
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74 <H2>
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75 <FONT SIZE="-1">
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76 jspp</FONT>
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77 <BR>
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78 Class SearchMatrix</H2>
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79 <PRE>
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80 java.lang.Object
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81 |
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82 +--<B>jspp.SearchMatrix</B>
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83 </PRE>
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84 <DL>
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85 <DT><B>All Implemented Interfaces:</B> <DD>java.io.Serializable</DD>
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86 </DL>
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87 <HR>
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88 <DL>
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89 <DT>public class <B>SearchMatrix</B><DT>extends java.lang.Object<DT>implements java.io.Serializable</DL>
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90
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91 <P>
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92 <DL>
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93 <DT><B>See Also:</B><DD><A HREF="../serialized-form.html" TARGET="jspp.SearchMatrix">Serialized Form</A></DL>
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94 <HR>
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95
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96 <P>
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97 <!-- ======== NESTED CLASS SUMMARY ======== -->
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98
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99
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100 <!-- =========== FIELD SUMMARY =========== -->
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101
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102
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103 <!-- ======== CONSTRUCTOR SUMMARY ======== -->
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104
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105 <A NAME="constructor_summary"><!-- --></A>
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106 <TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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107 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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108 <TD COLSPAN=2><FONT SIZE="+2">
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109 <B>Constructor Summary</B></FONT></TD>
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110 </TR>
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111 <TR BGCOLOR="white" CLASS="TableRowColor">
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112 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#SearchMatrix(int, int)">SearchMatrix</A></B>(int sequencelength,
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113 int cleavageposition)</CODE>
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114
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115 <BR>
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116 constructs an empty SearchMatrix</TD>
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117 </TR>
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118 <TR BGCOLOR="white" CLASS="TableRowColor">
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119 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#SearchMatrix(java.lang.String[], int)">SearchMatrix</A></B>(java.lang.String[] alignedsequences,
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120 int cleavageposition)</CODE>
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121
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122 <BR>
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123 constructs a new SearchMatrix</TD>
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124 </TR>
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125 </TABLE>
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126
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127 <!-- ========== METHOD SUMMARY =========== -->
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128
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129 <A NAME="method_summary"><!-- --></A>
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130 <TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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131 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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132 <TD COLSPAN=2><FONT SIZE="+2">
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133 <B>Method Summary</B></FONT></TD>
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134 </TR>
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135 <TR BGCOLOR="white" CLASS="TableRowColor">
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136 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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137 <CODE> void</CODE></FONT></TD>
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138 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#addSearchMatrix(jspp.SearchMatrix)">addSearchMatrix</A></B>(<A HREF="../jspp/SearchMatrix.html">SearchMatrix</A> matrix)</CODE>
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139
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140 <BR>
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141 Adds a complete SearchMatrix object to this SearchMatrixThe length of both SearchMatrix must be the same, otherwise a <CODE>SequenceLengthException</CODE> will be thrown </TD>
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142 </TR>
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143 <TR BGCOLOR="white" CLASS="TableRowColor">
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144 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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145 <CODE> void</CODE></FONT></TD>
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146 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#addSequence(java.lang.String)">addSequence</A></B>(java.lang.String sequence)</CODE>
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147
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148 <BR>
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149 Adds new sequences to the SearchMatrix. </TD>
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150 </TR>
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151 <TR BGCOLOR="white" CLASS="TableRowColor">
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152 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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153 <CODE> int</CODE></FONT></TD>
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154 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getCleavagePosition()">getCleavagePosition</A></B>()</CODE>
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155
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156 <BR>
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157 Returns the cleavage position.</TD>
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158 </TR>
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159 <TR BGCOLOR="white" CLASS="TableRowColor">
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160 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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161 <CODE> double</CODE></FONT></TD>
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162 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getCutOffScore()">getCutOffScore</A></B>()</CODE>
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163
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164 <BR>
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165 Returns the cutoff score</TD>
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166 </TR>
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167 <TR BGCOLOR="white" CLASS="TableRowColor">
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168 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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169 <CODE> double</CODE></FONT></TD>
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170 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getInformation(int)">getInformation</A></B>(int position)</CODE>
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171
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172 <BR>
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173 Returns the information contents of the specified position</TD>
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174 </TR>
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175 <TR BGCOLOR="white" CLASS="TableRowColor">
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176 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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177 <CODE> int[][]</CODE></FONT></TD>
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178 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getMatrix()">getMatrix</A></B>()</CODE>
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179
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180 <BR>
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181 Returns the alignment matrix</TD>
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182 </TR>
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183 <TR BGCOLOR="white" CLASS="TableRowColor">
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184 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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185 <CODE> double</CODE></FONT></TD>
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186 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getRawScore(java.lang.String)">getRawScore</A></B>(java.lang.String sequence)</CODE>
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187
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188 <BR>
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189 Returns the raw score</TD>
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190 </TR>
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191 <TR BGCOLOR="white" CLASS="TableRowColor">
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192 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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193 <CODE> double</CODE></FONT></TD>
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194 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getScore(java.lang.String)">getScore</A></B>(java.lang.String sequence)</CODE>
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195
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196 <BR>
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197 Returns the normalized score.</TD>
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198 </TR>
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199 <TR BGCOLOR="white" CLASS="TableRowColor">
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200 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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201 <CODE> int</CODE></FONT></TD>
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202 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#getSequenceLength()">getSequenceLength</A></B>()</CODE>
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203
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204 <BR>
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205 </TD>
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206 </TR>
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207 <TR BGCOLOR="white" CLASS="TableRowColor">
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208 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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209 <CODE> double</CODE></FONT></TD>
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210 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#raw2normalizedScore(double)">raw2normalizedScore</A></B>(double rawscore)</CODE>
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211
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212 <BR>
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213 Transfers a raw score to a normalized score</TD>
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214 </TR>
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215 <TR BGCOLOR="white" CLASS="TableRowColor">
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216 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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217 <CODE> void</CODE></FONT></TD>
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218 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#removeSequence(java.lang.String)">removeSequence</A></B>(java.lang.String sequence)</CODE>
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219
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220 <BR>
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221 Removes a sequence from the SearchMatrix The sequence length must be the same as the initial weight matrix size, otherwise a <CODE>SequenceLengthException</CODE> will be thrown </TD>
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222 </TR>
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223 <TR BGCOLOR="white" CLASS="TableRowColor">
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224 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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225 <CODE> void</CODE></FONT></TD>
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226 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#setFrequencyMatrix(jspp.SearchMatrix)">setFrequencyMatrix</A></B>(<A HREF="../jspp/SearchMatrix.html">SearchMatrix</A> sequences)</CODE>
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227
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228 <BR>
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229 Method for considering the amino acid background</TD>
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230 </TR>
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231 <TR BGCOLOR="white" CLASS="TableRowColor">
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232 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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233 <CODE> void</CODE></FONT></TD>
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234 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#setFrequencyMatrix(java.lang.String[])">setFrequencyMatrix</A></B>(java.lang.String[] sequences)</CODE>
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235
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236 <BR>
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237 Method for considering the amino acid background</TD>
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238 </TR>
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239 <TR BGCOLOR="white" CLASS="TableRowColor">
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240 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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241 <CODE> void</CODE></FONT></TD>
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242 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#setLimits(double, double)">setLimits</A></B>(double cutoff,
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243 double uppercutoff)</CODE>
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244
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245 <BR>
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246 Sets the limits for score normalization.</TD>
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247 </TR>
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248 <TR BGCOLOR="white" CLASS="TableRowColor">
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249 <TD ALIGN="right" VALIGN="top" WIDTH="1%"><FONT SIZE="-1">
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250 <CODE> void</CODE></FONT></TD>
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251 <TD><CODE><B><A HREF="../jspp/SearchMatrix.html#writeMatrix(java.io.File)">writeMatrix</A></B>(java.io.File file)</CODE>
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252
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253 <BR>
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254 Writes the content of this object as tabulator seperated values in a file</TD>
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255 </TR>
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256 </TABLE>
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257 <A NAME="methods_inherited_from_class_java.lang.Object"><!-- --></A>
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258 <TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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259 <TR BGCOLOR="#EEEEFF" CLASS="TableSubHeadingColor">
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260 <TD><B>Methods inherited from class java.lang.Object</B></TD>
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261 </TR>
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262 <TR BGCOLOR="white" CLASS="TableRowColor">
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263 <TD><CODE>equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait</CODE></TD>
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264 </TR>
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265 </TABLE>
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266
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267 <P>
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268
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269 <!-- ============ FIELD DETAIL =========== -->
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270
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271
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272 <!-- ========= CONSTRUCTOR DETAIL ======== -->
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273
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274 <A NAME="constructor_detail"><!-- --></A>
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275 <TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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276 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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277 <TD COLSPAN=1><FONT SIZE="+2">
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278 <B>Constructor Detail</B></FONT></TD>
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279 </TR>
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280 </TABLE>
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281
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282 <A NAME="SearchMatrix(java.lang.String[], int)"><!-- --></A><H3>
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283 SearchMatrix</H3>
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284 <PRE>
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285 public <B>SearchMatrix</B>(java.lang.String[] alignedsequences,
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286 int cleavageposition)</PRE>
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287 <DL>
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288 <DD>constructs a new SearchMatrix
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289 <P>
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290 <DT><B>Parameters:</B><DD><CODE>alignedsequences</CODE> - String-Array of aligned sequences<DD><CODE>cleavageposition</CODE> - cleavage position inside the aligned sequences</DL>
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291 <HR>
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292
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293 <A NAME="SearchMatrix(int, int)"><!-- --></A><H3>
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294 SearchMatrix</H3>
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295 <PRE>
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296 public <B>SearchMatrix</B>(int sequencelength,
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297 int cleavageposition)</PRE>
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298 <DL>
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299 <DD>constructs an empty SearchMatrix
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300 <P>
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301 <DT><B>Parameters:</B><DD><CODE>sequencelength</CODE> - length of sequences (signalpeptide+mature protein)<DD><CODE>cleavageposition</CODE> - cleavageposition, normally the same length as signalpeptide</DL>
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302
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303 <!-- ============ METHOD DETAIL ========== -->
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304
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305 <A NAME="method_detail"><!-- --></A>
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306 <TABLE BORDER="1" CELLPADDING="3" CELLSPACING="0" WIDTH="100%">
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307 <TR BGCOLOR="#CCCCFF" CLASS="TableHeadingColor">
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308 <TD COLSPAN=1><FONT SIZE="+2">
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309 <B>Method Detail</B></FONT></TD>
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310 </TR>
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311 </TABLE>
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312
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313 <A NAME="getSequenceLength()"><!-- --></A><H3>
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314 getSequenceLength</H3>
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315 <PRE>
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316 public int <B>getSequenceLength</B>()</PRE>
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317 <DL>
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318 <DD><DL>
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319 </DL>
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320 </DD>
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321 <DD><DL>
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322
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323 <DT><B>Returns:</B><DD>the sequence length of the aligned sequences</DL>
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324 </DD>
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325 </DL>
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326 <HR>
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327
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328 <A NAME="addSequence(java.lang.String)"><!-- --></A><H3>
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329 addSequence</H3>
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330 <PRE>
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331 public void <B>addSequence</B>(java.lang.String sequence)
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332 throws jspp.SequenceLengthException</PRE>
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333 <DL>
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334 <DD>Adds new sequences to the SearchMatrix. <p>The sequence length must be the same as the initial weight matrix size, otherwise a <CODE>SequenceLengthException</CODE> will be thrown </p>
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335 <P>
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336 <DD><DL>
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337 </DL>
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338 </DD>
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339 <DD><DL>
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340 <DT><B>Parameters:</B><DD><CODE>sequence</CODE> - the sequence to add to the matrix
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341 <DT><B>Throws:</B>
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342 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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343 </DD>
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344 </DL>
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345 <HR>
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346
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347 <A NAME="addSearchMatrix(jspp.SearchMatrix)"><!-- --></A><H3>
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348 addSearchMatrix</H3>
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349 <PRE>
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350 public void <B>addSearchMatrix</B>(<A HREF="../jspp/SearchMatrix.html">SearchMatrix</A> matrix)
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351 throws jspp.SequenceLengthException</PRE>
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352 <DL>
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353 <DD>Adds a complete SearchMatrix object to this SearchMatrix<p>The length of both SearchMatrix must be the same, otherwise a <CODE>SequenceLengthException</CODE> will be thrown </p>
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354 <P>
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355 <DD><DL>
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356 </DL>
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357 </DD>
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358 <DD><DL>
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359 <DT><B>Parameters:</B><DD><CODE>matrix</CODE> - SearchMatrix to add to this SearchMatrix
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360 <DT><B>Throws:</B>
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361 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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362 </DD>
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363 </DL>
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364 <HR>
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365
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366 <A NAME="removeSequence(java.lang.String)"><!-- --></A><H3>
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367 removeSequence</H3>
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368 <PRE>
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369 public void <B>removeSequence</B>(java.lang.String sequence)
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370 throws jspp.SequenceLengthException</PRE>
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371 <DL>
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372 <DD>Removes a sequence from the SearchMatrix <p>The sequence length must be the same as the initial weight matrix size, otherwise a <CODE>SequenceLengthException</CODE> will be thrown </p>
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373 <P>
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374 <DD><DL>
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375 </DL>
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376 </DD>
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377 <DD><DL>
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378 <DT><B>Parameters:</B><DD><CODE>sequence</CODE> - Sequence to remove from the SearchMatrix
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379 <DT><B>Throws:</B>
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380 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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381 </DD>
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382 </DL>
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383 <HR>
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384
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385 <A NAME="getCleavagePosition()"><!-- --></A><H3>
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386 getCleavagePosition</H3>
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387 <PRE>
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388 public int <B>getCleavagePosition</B>()</PRE>
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389 <DL>
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390 <DD>Returns the cleavage position.
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391 <P>
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392 <DD><DL>
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393 </DL>
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394 </DD>
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395 <DD><DL>
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396
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397 <DT><B>Returns:</B><DD>the cleavage position.</DL>
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398 </DD>
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399 </DL>
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400 <HR>
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401
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402 <A NAME="setLimits(double, double)"><!-- --></A><H3>
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403 setLimits</H3>
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404 <PRE>
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405 public void <B>setLimits</B>(double cutoff,
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406 double uppercutoff)</PRE>
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407 <DL>
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408 <DD>Sets the limits for score normalization.<p>Scores are normalized in a linear manner, where cutoff is normalized to 0.5 and uppercuttoff is normalized to 1.0.</p>
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409 <P>
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410 <DD><DL>
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411 </DL>
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412 </DD>
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413 <DD><DL>
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414 <DT><B>Parameters:</B><DD><CODE>cutoff</CODE> - cutoff-score will be normalized to 0.5.<DD><CODE>uppercutoff</CODE> - upper-limit will be normalized to 1.0.</DL>
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415 </DD>
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416 </DL>
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417 <HR>
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418
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419 <A NAME="getScore(java.lang.String)"><!-- --></A><H3>
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420 getScore</H3>
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421 <PRE>
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422 public double <B>getScore</B>(java.lang.String sequence)
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423 throws jspp.SequenceLengthException</PRE>
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424 <DL>
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425 <DD>Returns the normalized score.<p>Method <A HREF="../jspp/SearchMatrix.html#setLimits(double, double)"><CODE>setLimits()</CODE></A> should be called before.</p>
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426 <P>
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427 <DD><DL>
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428 </DL>
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429 </DD>
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430 <DD><DL>
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431 <DT><B>Parameters:</B><DD><CODE>sequence</CODE> - sequence for score calculation
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432 <DT><B>Returns:</B><DD>a normalized score for <CODE>sequence</CODE>
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433 <DT><B>Throws:</B>
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434 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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435 </DD>
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436 </DL>
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437 <HR>
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438
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439 <A NAME="getRawScore(java.lang.String)"><!-- --></A><H3>
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440 getRawScore</H3>
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441 <PRE>
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442 public double <B>getRawScore</B>(java.lang.String sequence)
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443 throws jspp.SequenceLengthException</PRE>
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444 <DL>
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445 <DD>Returns the raw score
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446 <P>
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447 <DD><DL>
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448 </DL>
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449 </DD>
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450 <DD><DL>
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451 <DT><B>Parameters:</B><DD><CODE>sequence</CODE> - sequence for score calculation
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452 <DT><B>Returns:</B><DD>the raw score
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453 <DT><B>Throws:</B>
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454 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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455 </DD>
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456 </DL>
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457 <HR>
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458
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459 <A NAME="getCutOffScore()"><!-- --></A><H3>
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460 getCutOffScore</H3>
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461 <PRE>
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462 public double <B>getCutOffScore</B>()</PRE>
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463 <DL>
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464 <DD>Returns the cutoff score
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465 <P>
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466 <DD><DL>
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467 </DL>
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468 </DD>
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469 <DD><DL>
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470
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471 <DT><B>Returns:</B><DD>the cutoff score</DL>
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472 </DD>
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473 </DL>
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474 <HR>
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475
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476 <A NAME="raw2normalizedScore(double)"><!-- --></A><H3>
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477 raw2normalizedScore</H3>
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478 <PRE>
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479 public double <B>raw2normalizedScore</B>(double rawscore)</PRE>
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480 <DL>
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481 <DD>Transfers a raw score to a normalized score
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482 <P>
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483 <DD><DL>
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484 </DL>
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485 </DD>
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486 <DD><DL>
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487 <DT><B>Parameters:</B><DD><CODE>rawscore</CODE> - the raw score
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488 <DT><B>Returns:</B><DD>the normalized score</DL>
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489 </DD>
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490 </DL>
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491 <HR>
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492
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493 <A NAME="getInformation(int)"><!-- --></A><H3>
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494 getInformation</H3>
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495 <PRE>
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496 public double <B>getInformation</B>(int position)
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497 throws jspp.SequenceLengthException</PRE>
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498 <DL>
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499 <DD>Returns the information contents of the specified position
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500 <P>
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501 <DD><DL>
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502 </DL>
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503 </DD>
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504 <DD><DL>
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505 <DT><B>Parameters:</B><DD><CODE>position</CODE> - the weight matrix position
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506 <DT><B>Returns:</B><DD>the information content of specified weight matrix position
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507 <DT><B>Throws:</B>
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508 <DD><CODE>jspp.SequenceLengthException</CODE></DL>
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509 </DD>
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510 </DL>
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511 <HR>
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512
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513 <A NAME="getMatrix()"><!-- --></A><H3>
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514 getMatrix</H3>
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515 <PRE>
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516 public int[][] <B>getMatrix</B>()</PRE>
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517 <DL>
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518 <DD>Returns the alignment matrix
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519 <P>
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520 <DD><DL>
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521 </DL>
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522 </DD>
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523 <DD><DL>
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524
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525 <DT><B>Returns:</B><DD>the alignment matrix</DL>
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526 </DD>
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527 </DL>
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528 <HR>
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529
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530 <A NAME="setFrequencyMatrix(java.lang.String[])"><!-- --></A><H3>
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531 setFrequencyMatrix</H3>
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532 <PRE>
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533 public void <B>setFrequencyMatrix</B>(java.lang.String[] sequences)</PRE>
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534 <DL>
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535 <DD>Method for considering the amino acid background
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536 <P>
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537 <DD><DL>
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538 </DL>
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539 </DD>
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540 <DD><DL>
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541 <DT><B>Parameters:</B><DD><CODE>sequences</CODE> - array of Strings containing sequences of dependent organism / group</DL>
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542 </DD>
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543 </DL>
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544 <HR>
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545
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546 <A NAME="setFrequencyMatrix(jspp.SearchMatrix)"><!-- --></A><H3>
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547 setFrequencyMatrix</H3>
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548 <PRE>
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549 public void <B>setFrequencyMatrix</B>(<A HREF="../jspp/SearchMatrix.html">SearchMatrix</A> sequences)</PRE>
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550 <DL>
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551 <DD>Method for considering the amino acid background
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552 <P>
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553 <DD><DL>
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554 </DL>
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555 </DD>
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556 <DD><DL>
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557 <DT><B>Parameters:</B><DD><CODE>sequences</CODE> - sequences stored in a SearchMatrix object</DL>
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558 </DD>
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559 </DL>
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560 <HR>
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561
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562 <A NAME="writeMatrix(java.io.File)"><!-- --></A><H3>
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563 writeMatrix</H3>
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564 <PRE>
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565 public void <B>writeMatrix</B>(java.io.File file)
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566 throws java.io.IOException</PRE>
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567 <DL>
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568 <DD>Writes the content of this object as tabulator seperated values in a file
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569 <P>
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570 <DD><DL>
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571 </DL>
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572 </DD>
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573 <DD><DL>
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574 <DT><B>Parameters:</B><DD><CODE>file</CODE> - the output file
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575 <DT><B>Throws:</B>
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576 <DD><CODE>java.io.IOException</CODE></DL>
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577 </DD>
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578 </DL>
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579 <!-- ========= END OF CLASS DATA ========= -->
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580 <HR>
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581
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582 <!-- ========== START OF NAVBAR ========== -->
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589 <TR ALIGN="center" VALIGN="top">
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590 <TD BGCOLOR="#EEEEFF" CLASS="NavBarCell1"> <A HREF="package-summary.html"><FONT CLASS="NavBarFont1"><B>Package</B></FONT></A> </TD>
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599 <TD ALIGN="right" VALIGN="top" ROWSPAN=3><EM>
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600 </EM>
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601 </TD>
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603
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604 <TR>
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606 <A HREF="../jspp/JSPP.html"><B>PREV CLASS</B></A>
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609 <A HREF="../index.html" TARGET="_top"><B>FRAMES</B></A>
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610 <A HREF="SearchMatrix.html" TARGET="_top"><B>NO FRAMES</B></A>
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611
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612 <SCRIPT>
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613 <!--
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614 if(window==top) {
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615 document.writeln('<A HREF="../allclasses-noframe.html" TARGET=""><B>All Classes</B></A>');
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616 }
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617 //-->
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624 <TR>
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625 <TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
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626 SUMMARY: NESTED | FIELD | <A HREF="#constructor_summary">CONSTR</A> | <A HREF="#method_summary">METHOD</A></FONT></TD>
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627 <TD VALIGN="top" CLASS="NavBarCell3"><FONT SIZE="-2">
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628 DETAIL: FIELD | <A HREF="#constructor_detail">CONSTR</A> | <A HREF="#method_detail">METHOD</A></FONT></TD>
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