Mercurial > repos > ebi-gxa > suite_seurat

changeset 1:a9e17f20ff51 draft default tip

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planemo upload commit 34c30124158749b9eef51d5f323b608a503e7940
author ebi-gxa
date Sun, 01 Oct 2023 09:08:02 +0000
parents 6b964c3015a9
children
files repository_dependencies.xml
diffstat 1 files changed, 19 insertions(+), 12 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Wed Mar 13 13:11:35 2019 -0400
+++ b/repository_dependencies.xml	Sun Oct 01 09:08:02 2023 +0000
@@ -1,15 +1,22 @@
 <?xml version="1.0" ?>
 <repositories description="Seurat – R toolkit for single cell genomics">
-    <repository changeset_revision="22af739a27c0" name="seurat_run_pca" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="fda1f7579646" name="seurat_filter_cells" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="45d02a754a7d" name="seurat_export_cellbrowser" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="bf0e50f4f010" name="seurat_find_clusters" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="e3785657d6c8" name="seurat_find_markers" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="e683206b4f6f" name="seurat_find_variable_genes" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="fa4509d3f0aa" name="seurat_read10x" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="7ef152a02e71" name="seurat_scale_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="221cc4a7ef6e" name="seurat_run_tsne" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="28bf28ee53b6" name="seurat_create_seurat_object" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="d539788175d4" name="seurat_dim_plot" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-    <repository changeset_revision="fe2f888644e6" name="seurat_normalise_data" owner="ebi-gxa" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
+    <repository owner="ebi-gxa" name="seurat_run_pca" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4537f23ce2ad"/>
+    <repository owner="ebi-gxa" name="seurat_filter_cells" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="040ab5587f2a"/>
+    <repository owner="ebi-gxa" name="seurat_map_query" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="9a68428ae952"/>
+    <repository owner="ebi-gxa" name="seurat_export_cellbrowser" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="d0ab20c5b81d"/>
+    <repository owner="ebi-gxa" name="seurat_select_integration_features" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="18ec65ff4ee5"/>
+    <repository owner="ebi-gxa" name="seurat_find_clusters" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="ea5b47974d4f"/>
+    <repository owner="ebi-gxa" name="seurat_plot" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="026272e020d3"/>
+    <repository owner="ebi-gxa" name="seurat_find_markers" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="852e501d4d21"/>
+    <repository owner="ebi-gxa" name="seurat_find_variable_genes" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="71156de66d88"/>
+    <repository owner="ebi-gxa" name="seurat_read10x" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="1904975137cb"/>
+    <repository owner="ebi-gxa" name="seurat_convert" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c7a07037f817"/>
+    <repository owner="ebi-gxa" name="seurat_scale_data" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="412e62cb6cf7"/>
+    <repository owner="ebi-gxa" name="seurat_run_tsne" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="c29ee423c9c1"/>
+    <repository owner="ebi-gxa" name="seurat_run_umap" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="7c4c953db399"/>
+    <repository owner="ebi-gxa" name="seurat_dim_plot" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="4e73c73291cd"/>
+    <repository owner="ebi-gxa" name="seurat_normalise_data" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="87de4824cb32"/>
+    <repository owner="ebi-gxa" name="seurat_integration" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="89852069ad6a"/>
+    <repository owner="ebi-gxa" name="seurat_hover_locator" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="f99df1c3dfa6"/>
+    <repository owner="ebi-gxa" name="seurat_find_neighbours" toolshed="https://testtoolshed.g2.bx.psu.edu" changeset_revision="5b7b0aa8763e"/>
 </repositories>
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