changeset 1:7ef152a02e71 draft

planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 0a95e950ac73efdc9e84025ecb547e66fc3b83f6

--- a/seurat_macros.xml	Mon Mar 04 12:14:28 2019 -0500
+++ b/seurat_macros.xml	Wed Mar 13 12:52:17 2019 -0400
@@ -22,9 +22,29 @@
       <param name="dims_use" argument="--dims-use" min="1" optional="true" type="integer" label="PCA Dimensions to use" help="Number of PCs (dimensions) to use in construction of the SNN graph."/>
     </xml>
 
+    <token name="@VERSION_HISTORY@"><![CDATA[
+**Version history**
+
+0.0.1: Initial contribution. Maria Doyle, https://github.com/mblue9.
+
+2.3.1+galaxy0: Improved documentation and further exposition of all script's options. Pablo Moreno, Jonathan Manning and Ni Huang, Expression Atlas team https://www.ebi.ac.uk/gxa/home  at
+EMBL-EBI https://www.ebi.ac.uk/. Parts obtained from wrappers from Christophe Antoniewski(https://github.com/drosofff) and Lea Bellenger(https://github.com/bellenger-l).
+      ]]></token>
+
+
     <xml name="citations">
         <citations>
             <citation type="doi">10.1038/nbt.4096</citation>
+            <citation type="bibtex">
+              @misc{r-seurat-scripts.git,
+              author = {Jonathan Manning, Pablo Moreno, EBI Gene Expression Team},
+              year = {2018},
+              title = {Seurat-scripts: command line interface for Seurat},
+              publisher = {GitHub},
+              journal = {GitHub repository},
+              url = {https://github.com/ebi-gene-expression-group/r-seurat-scripts.git},
+            }
+            </citation>
         </citations>
     </xml>
 </macros>

--- a/seurat_scale_data.xml	Mon Mar 04 12:14:28 2019 -0500
+++ b/seurat_scale_data.xml	Wed Mar 13 12:52:17 2019 -0400
@@ -107,6 +107,7 @@
 .. _Seurat: https://www.nature.com/articles/nbt.4096
 .. _Satija Lab: https://satijalab.org/seurat/
 
+@VERSION_HISTORY@
 ]]></help>
       <expand macro="citations" />
 </tool>