changeset 4:e36cb0413c39 draft

planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit f6a8d0f8eb4225276e3db9e5ca04b7d11bac5bf6-dirty
author ebi-gxa
date Thu, 16 Jul 2020 10:58:21 +0000
parents a4bfd4a146ec
children 7fc311b62935
files atlas-retrieve-macros.xml retrieve-scxa.xml
diffstat 2 files changed, 6 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/atlas-retrieve-macros.xml	Thu Jul 16 10:48:16 2020 +0000
+++ b/atlas-retrieve-macros.xml	Thu Jul 16 10:58:21 2020 +0000
@@ -8,6 +8,11 @@
             <yield/>
       </requirements>
     </xml>
+    <xml name="version">
+      <version_command><![CDATA[
+        conda list | grep atlas-data-import | egrep -o [0-9]\.[0-9]\.[0-9]
+    ]]></version_command>
+    </xml>
     <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 0.0.6+galaxy0: Initial contribution. Andrey Solovyev, Expression Atlas team https://www.ebi.ac.uk/gxa/home at EMBL-EBI https://www.ebi.ac.uk/.
--- a/retrieve-scxa.xml	Thu Jul 16 10:48:16 2020 +0000
+++ b/retrieve-scxa.xml	Thu Jul 16 10:58:21 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="retrieve_scxa" name="Atlas import: get experiment data" version="1.0.0+galaxy0"  profile="@PROFILE@">
+<tool id="retrieve_scxa" name="Atlas import: get experiment data" version="1@TOOL_VERSION@+galaxy0"  profile="@PROFILE@">
     <description>Retrieve expression matrices and metadata from EBI Single Cell Expression Atlas (SCXA)</description>
     <macros>
          <import>atlas-retrieve-macros.xml</import>