Mercurial > repos > ebi-gxa > atlas_import_classifiers

changeset 2:373e274e398e draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit f6a8d0f8eb4225276e3db9e5ca04b7d11bac5bf6-dirty
author ebi-gxa
date Thu, 16 Jul 2020 10:57:56 +0000
parents 511692476200
children d8c8805b2f6d
files atlas-retrieve-macros.xml retrieve-classification-data.xml
diffstat 2 files changed, 6 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/atlas-retrieve-macros.xml	Thu Jul 16 10:47:48 2020 +0000
+++ b/atlas-retrieve-macros.xml	Thu Jul 16 10:57:56 2020 +0000
@@ -8,6 +8,11 @@
             <yield/>
       </requirements>
     </xml>
+    <xml name="version">
+      <version_command><![CDATA[
+        conda list | grep atlas-data-import | egrep -o [0-9]\.[0-9]\.[0-9]
+    ]]></version_command>
+    </xml>
     <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 0.0.6+galaxy0: Initial contribution. Andrey Solovyev, Expression Atlas team https://www.ebi.ac.uk/gxa/home at EMBL-EBI https://www.ebi.ac.uk/.
--- a/retrieve-classification-data.xml	Thu Jul 16 10:47:48 2020 +0000
+++ b/retrieve-classification-data.xml	Thu Jul 16 10:57:56 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="atlas_import_classifiers" name="Atlas import: get classifiers" version="1.0.0+galaxy0"  profile="@PROFILE@">
+<tool id="atlas_import_classifiers" name="Atlas import: get classifiers" version="@TOOL_VERSION@+galaxy0"  profile="@PROFILE@">
     <description>Import pre-trained classifiers and SDRF files for a range of studies from Single Cell Expression Atlas</description>
     <macros>
          <import>atlas-retrieve-macros.xml</import>