Mercurial > repos > dvanzessen > vep_emc

changeset 9:c496eb89ac0b draft

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Uploaded
author dvanzessen
date Thu, 27 Feb 2020 14:22:58 +0000
parents 555f164fc595
children f594c6bed58f
files vep.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/vep.xml	Wed Jul 17 08:40:22 2019 -0400
+++ b/vep.xml	Thu Feb 27 14:22:58 2020 +0000
@@ -59,15 +59,15 @@
 
         vep 
         --format vcf 
-        --VCF
+        --vcf
         --no_stats
         --dir_plugins $__tool_directory__/dir_plugins
         --cache
         --dir_cache "\$VEP_CACHE_DIR"
         --force_overwrite
         --species ${species}
-        $cache_type
-        --input_file "$input" 
+        --cache_version 97
+        --input_file "$input"
         --output_file "$output"
         $offline
         $output_options.variant_class