Mercurial > repos > drosofff > msp_sr_size_histograms

changeset 5:27c1327f5687 draft

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planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_size_histograms commit fe40dec87779c1fcfbd03330e653aa886f4a2cda
author drosofff
date Wed, 21 Oct 2015 11:40:35 -0400
parents f0b489448615
children 51a70c8da2bd
files size_histogram.xml tool_dependencies.xml
diffstat 2 files changed, 7 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/size_histogram.xml	Mon Jun 29 05:56:53 2015 -0400
+++ b/size_histogram.xml	Wed Oct 21 11:40:35 2015 -0400
@@ -1,8 +1,9 @@
-<tool id="Size_histogram" name="Generate size histograms from alignment files" version="0.9.6">
+<tool id="Size_histogram" name="Generate size histograms from alignment files" version="0.9.7">
   <description>from sRbowtie aligment</description>
   <requirements>
         <requirement type="package" version="0.12.7">bowtie</requirement>
         <requirement type="package" version="0.7.7">pysam</requirement>
+        <requirement type="package" version="3.1.2">R</requirements>
         <requirement type="package" version="2.14">biocbasics</requirement>
         <requirement type="package" version="1.9">numpy</requirement>
   </requirements>
--- a/tool_dependencies.xml	Mon Jun 29 05:56:53 2015 -0400
+++ b/tool_dependencies.xml	Wed Oct 21 11:40:35 2015 -0400
@@ -7,9 +7,12 @@
       <repository changeset_revision="ca10c522f37e" name="package_pysam_0_7_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="numpy" version="1.9">
-        <repository changeset_revision="43cb426cb05d" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="816d3480b0b1" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="R" version="3.1.2">
+        <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="biocbasics" version="2.14">
-        <repository changeset_revision="565bfe059907" name="package_biocbasics" owner="mvdbeek" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="d243626801e2" name="package_biocbasics_2_14" owner="mvdbeek" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>