Mercurial > repos > drosofff > msp_sr_readmap_and_size_histograms
changeset 20:99f478136171 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_readmap_and_size_histograms commit 78fca5d46c4554514bc51b0010a7611aaced40b9-dirty
author | drosofff |
---|---|
date | Thu, 04 Feb 2016 06:55:38 -0500 |
parents | f75315939afe |
children | 6fbd21abde56 |
files | readmap.xml |
diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/readmap.xml Thu Feb 04 06:28:28 2016 -0500 +++ b/readmap.xml Thu Feb 04 06:55:38 2016 -0500 @@ -1,4 +1,4 @@ -<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.1.3"> +<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.1.4"> <description>from sRbowtie aligment</description> <requirements> <requirement type="package" version="0.12.7">bowtie</requirement> @@ -158,7 +158,7 @@ ## GRAPHS if (n_genes > 7) {page_height_simple = 11.69; page_height_combi=11.69; rows_per_page=${rows_per_page}; extrarow=0 } else { - rows_per_page= 8; page_height_simple = 11.69; page_height_combi=11.69; extrarow=0 } + rows_per_page= n_genes; page_height_simple = 1.67*n_genes; page_height_combi=page_height_simple*2; extrarow=0 } ## rows_per_page= 8; page_height_simple = 11.69/7*n_genes; page_height_combi=11.69/9*(n_genes*2); extrarow=0 } ## rows_per_page= n_genes; page_height_simple = 11.69/n_genes/4; page_height_combi=11.69/(n_genes*2); extrarow=1 } if (n_samples > 4) {page_width = 8.2677*n_samples/4} else {page_width = 8.2677*n_samples/3} # to test