Mercurial > repos > drosofff > msp_sr_readmap_and_size_histograms
changeset 5:6ee5a6e89aa4 draft
planemo upload for repository https://bitbucket.org/drosofff/gedtools/ commit 8d708b1a6643c06464e00e9e41d271474a85c0ba
| author | mvdbeek |
|---|---|
| date | Wed, 21 Oct 2015 09:31:37 -0400 |
| parents | dffa22efc6a8 |
| children | 0f7cf7fb3465 |
| files | readmap.xml tool_dependencies.xml |
| diffstat | 2 files changed, 6 insertions(+), 2 deletions(-) [+] |
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--- a/readmap.xml Mon Jun 29 05:54:47 2015 -0400 +++ b/readmap.xml Wed Oct 21 09:31:37 2015 -0400 @@ -1,9 +1,10 @@ -<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.0.2"> +<tool id="Readmap" name="Generate readmap and histograms from alignment files" version="1.0.3"> <description>from sRbowtie aligment</description> <requirements> <requirement type="package" version="0.12.7">bowtie</requirement> <requirement type="package" version="0.7.7">pysam</requirement> <requirement type="package" version="2.14">biocbasics</requirement> + <requirement type="package" version="3.1.2">R</requirement> <requirement type="package" version="1.9">numpy</requirement> </requirements> <command interpreter="python">
--- a/tool_dependencies.xml Mon Jun 29 05:54:47 2015 -0400 +++ b/tool_dependencies.xml Wed Oct 21 09:31:37 2015 -0400 @@ -7,7 +7,10 @@ <repository changeset_revision="ca10c522f37e" name="package_pysam_0_7_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="numpy" version="1.9"> - <repository changeset_revision="43cb426cb05d" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="816d3480b0b1" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="R" version="3.1.2"> + <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="biocbasics" version="2.14"> <repository changeset_revision="565bfe059907" name="package_biocbasics" owner="mvdbeek" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />