Mercurial > repos > dpryan79 > bwameth
annotate tool-data/bwameth_indexes.loc.sample @ 20:5924e53ef39c draft default tip
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| author | dpryan79 |
|---|---|
| date | Thu, 15 Sep 2016 04:57:12 -0400 |
| parents | 596690559dab |
| children |
| rev | line source |
|---|---|
| 1 | 1 # This is a sample file distributed with Galaxy that is used to define a |
| 2 # list of bwa-meth indices, using three columns tab separated: | |
| 3 # | |
| 20 | 4 # <unique_build_id> <dbkey> <display_name> <genome_fasta_file_path> |
| 1 | 5 # |
| 6 # An index can be created with the following command: | |
| 7 # | |
| 8 # bwameth.py index /some/path/genome.fa | |
| 9 # | |
| 10 # "/some/path/genome.fa" would then be the last column in the line | |
| 20 | 11 # If this were for the mm10 mouse genome, the resulting entry would look like: |
| 12 # | |
| 13 #mm9 mm9 Mouse (mm9) /some/path/genome.fa | |
| 14 # | |
| 15 # |