Mercurial > repos > dfornika > pick_plasmids_containing_genes
changeset 1:ffa984b55de7 draft
"planemo upload for repository https://github.com/dfornika/galaxy/tree/master/tools/pick_plasmids_containing_genes commit bf17791d0ee6756ebbd306614617f52034b8741c-dirty"
| author | dfornika |
|---|---|
| date | Sat, 02 Nov 2019 00:34:49 -0400 |
| parents | a938371b3bfd |
| children | 2dd1a0ed7cce |
| files | abricate_report_screening_files.loc.sample tool_data_table_conf.xml.sample |
| diffstat | 2 files changed, 15 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/abricate_report_screening_files.loc.sample Sat Nov 02 00:34:49 2019 -0400 @@ -0,0 +1,7 @@ +# Expect three columns, tab separated, as follows: +# - value (Galaxy records this in the Galaxy DB) +# - name (Galaxy shows this in the UI) +# - path (Path to the abricate report screening file (tsv format)) +# +# e.g. +# 76cc857a-7747-4d69-b2a3-a8fbddbf64c2<tab>Carbapenemase Genes<tab>/path/to/screening_file.tsv
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Sat Nov 02 00:34:49 2019 -0400 @@ -0,0 +1,8 @@ +<?xml version="1.0"?> +<tables> + <!-- Locations of abricate report screening files in the required format --> + <table name="abricate_report_screening_files" comment_char="#"> + <columns>value, name, path</columns> + <file path="tool-data/abricate_report_screening_files.loc" /> + </table> +</tables>