changeset 18:bf35d745b493 draft

planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mob_suite_database/ commit ded3b42d8a746eac2973cc17826160e43ac11186-dirty
author dfornika
date Mon, 24 Jun 2019 14:38:54 -0400
parents 746cfbee7afd
children 6883b8116d0d
files data_manager/mob_suite_build_database.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/mob_suite_build_database.py	Mon Jun 24 14:31:39 2019 -0400
+++ b/data_manager/mob_suite_build_database.py	Mon Jun 24 14:38:54 2019 -0400
@@ -60,7 +60,7 @@
     subprocess.check_call(['makeblastdb'] + makeblastdb_args_list, cwd=target_directory)
 
     mash_sketch_args_list = [
-        '-i', database_path,
+        '-i', os.path.join(database_path, 'ncbi_plasmid_full_seqs.fas'),
     ]
 
     subprocess.check_call(['mash', 'sketch'] + mash_sketch_args_list, cwd=target_directory)