Mercurial > repos > dfornika > data_manager_build_mob_suite_database
changeset 18:bf35d745b493 draft
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mob_suite_database/ commit ded3b42d8a746eac2973cc17826160e43ac11186-dirty
author | dfornika |
---|---|
date | Mon, 24 Jun 2019 14:38:54 -0400 |
parents | 746cfbee7afd |
children | 6883b8116d0d |
files | data_manager/mob_suite_build_database.py |
diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
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--- a/data_manager/mob_suite_build_database.py Mon Jun 24 14:31:39 2019 -0400 +++ b/data_manager/mob_suite_build_database.py Mon Jun 24 14:38:54 2019 -0400 @@ -60,7 +60,7 @@ subprocess.check_call(['makeblastdb'] + makeblastdb_args_list, cwd=target_directory) mash_sketch_args_list = [ - '-i', database_path, + '-i', os.path.join(database_path, 'ncbi_plasmid_full_seqs.fas'), ] subprocess.check_call(['mash', 'sketch'] + mash_sketch_args_list, cwd=target_directory)