Mercurial > repos > dfornika > data_manager_build_mob_suite_database

changeset 11:4aaf84577a7b draft

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planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mob_suite_database/ commit ecc87b04e2f486f941c6eb4746738690db3a9e94-dirty
author dfornika
date Fri, 21 Jun 2019 20:34:02 -0400
parents c0f35fbf421f
children 330ca21dddd9
files data_manager/mob_suite_build_database.py
diffstat 1 files changed, 2 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/mob_suite_build_database.py	Fri Jun 21 20:23:15 2019 -0400
+++ b/data_manager/mob_suite_build_database.py	Fri Jun 21 20:34:02 2019 -0400
@@ -24,12 +24,12 @@
 
     database_name = database_name
 
-    database_path = mob_cluster_args['outdir']
+    database_path = database_value
 
     args = [
         '--num_threads', mob_cluster_args['num_threads'],
         '--infile', mob_cluster_args['infile'],
-        '--outdir', mob_cluster_args['outdir'],
+        '--outdir', database_path,
         '--mode', mob_cluster_args['mode'],
     ]
 
@@ -76,7 +76,6 @@
         'num_threads': args.threads,
         'infile': args.input,
         'mode': 'build',
-        'outdir': 'out',
     }
     
     data_manager_output = mob_suite_build_database_mob_cluster(