Mercurial > repos > dfornika > data_manager_build_mash_sketch
changeset 6:0ea6c4c00aab draft
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_mash_sketch/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
author | dfornika |
---|---|
date | Thu, 25 Jul 2019 14:46:56 -0400 |
parents | f4bc3b60a16d |
children | 628353238ad1 |
files | data_manager/mash_build_sketch.py |
diffstat | 1 files changed, 8 insertions(+), 0 deletions(-) [+] |
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--- a/data_manager/mash_build_sketch.py Thu Jul 25 13:59:05 2019 -0400 +++ b/data_manager/mash_build_sketch.py Thu Jul 25 14:46:56 2019 -0400 @@ -26,6 +26,14 @@ database_path = database_value + try: + os.mkdir( os.path.join(target_directory, database_path) ) + except OSError as exc: + if exc.errno == errno.EEXIST and os.path.isdir( os.path.join(target_directory, database_path) ): + pass + else: + raise + mash_sketch_args_list = [ '-p', mash_args['threads'], '-k', mash_args['kmer_size'],