Mercurial > repos > dfornika > data_manager_build_bracken_database
changeset 1:5a1116c3e2c8 draft
planemo upload for repository https://github.com/dfornika/galaxytools/tree/master/data_managers/data_manager_build_bracken_database/ commit 423cf96266f6ac433052ff72edb1397502313010-dirty
| author | dfornika |
|---|---|
| date | Fri, 26 Jul 2019 16:54:43 -0400 |
| parents | a391d55f928a |
| children | b9a0e4d0d310 |
| files | data_manager_conf.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/data_manager_conf.xml Fri Jul 26 16:00:08 2019 -0400 +++ b/data_manager_conf.xml Fri Jul 26 16:54:43 2019 -0400 @@ -1,15 +1,15 @@ <data_managers> - <data_manager tool_file="data_manager/mash_build_sketch.xml" id="mash_build_sketch" version="2.1+galaxy0"> - <data_table name="mash_sketches"> + <data_manager tool_file="data_manager/bracken_build_database.xml" id="bracken_build_database" version="2.2+galaxy0"> + <data_table name="bracken_databases"> <output> <column name="value"/> <column name="name"/> <column name="path" output_ref="out_file"> <move type="file"> <source>#import os#${os.path.dirname($path)}</source> - <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">mash_sketches/#import os#${os.path.dirname($path)}</target> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">bracken_databases/#import os#${os.path.dirname($path)}</target> </move> - <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/mash_sketches/${path}</value_translation> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/bracken_databases/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output>