Mercurial > repos > devteam > vcfgeno2haplo

annotate test-data/vcflib-phix.vcf @ 0:74d4e986f488 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 12:32:31 -0500
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74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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1 ##fileformat=VCFv4.1
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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2 ##fileDate=20140610
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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3 ##source=Dan
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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4 ##reference=file:///galaxy/data/phiX/sam_index/phiX.fa
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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5 ##filter="AF > .001"
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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6 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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7 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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8 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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9 ##FORMAT=<ID=AC,Number=.,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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10 ##FORMAT=<ID=AF,Number=.,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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11 ##FORMAT=<ID=NC,Number=.,Type=String,Description="Nucleotide and indel counts">
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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12 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT groupA groupB
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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13 phiX174 1015 . A C 0 . AC=2;AF=0.0555555555556 GT:AC:AF:NC 0:0,2:0,0.2:A=8,C=2,G=1, 0:0,0:0,0:A=26,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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14 phiX174 1016 . A T 0 . AC=2;AF=0.0555555555556 GT:AC:AF:NC 0:0:0:A=10, 0:2:0.0769230769231:A=24,T=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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15 phiX174 1038 . A C 0 . AC=2;AF=0.046511627907 GT:AC:AF:NC 0:2:0.153846153846:A=11,C=2, 0:0:0:A=30,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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16 phiX174 1045 . T G 0 . AC=2;AF=0.0425531914894 GT:AC:AF:NC 0:0:0:T=15,G=1, 0:2:0.0625:T=30,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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17 phiX174 1048 . C A 0 . AC=2;AF=0.0434782608696 GT:AC:AF:NC 0:2:0.133333333333:A=2,C=13, 0:0:0:C=31,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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18 phiX174 1050 . A C 0 . AC=3;AF=0.0714285714286 GT:AC:AF:NC 0:0:0:A=12, 0:3:0.1:A=27,C=3,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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19 phiX174 1051 . T G 0 . AC=2;AF=0.0487804878049 GT:AC:AF:NC 0:2:0.166666666667:C=1,T=10,G=2, 0:0:0:T=29,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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20 phiX174 1054 . T G 0 . AC=2;AF=0.0454545454545 GT:AC:AF:NC 0:2:0.153846153846:T=11,G=2, 0:0:0:T=31,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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21 phiX174 1076 . G C 0 . AC=2;AF=0.0363636363636 GT:AC:AF:NC 0:2:0.105263157895:A=1,C=2,G=17, 0:0:0:G=36,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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22 phiX174 1080 . G C 0 . AC=2;AF=0.0344827586207 GT:AC:AF:NC 0:2:0.105263157895:A=1,C=2,T=1,G=17, 0:0:0:C=1,G=39,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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23 phiX174 1092 . T G 0 . AC=2;AF=0.0263157894737 GT:AC:AF:NC 0:2:0.0833333333333:C=1,T=22,G=2, 0:0:0:T=52,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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24 phiX174 1093 . T G 0 . AC=2;AF=0.025974025974 GT:AC:AF:NC 0:2:0.08:T=23,G=2, 0:0:0:T=52,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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25 phiX174 1102 . T C 0 . AC=6;AF=0.0779220779221 GT:AC:AF:NC 0:2:0.0869565217391:C=2,T=21, 0:4:0.0740740740741:C=4,T=50,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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26 phiX174 1107 . T G 0 . AC=2;AF=0.0277777777778 GT:AC:AF:NC 0:0:0:T=22,G=1, 0:2:0.04:T=48,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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27 phiX174 1110 . T C 0 . AC=2;AF=0.0277777777778 GT:AC:AF:NC 0:2:0.125:C=2,T=14, 0:0:0:C=1,T=56,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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28 phiX174 1121 . T G 0 . AC=3;AF=0.041095890411 GT:AC:AF:NC 0:0:0:T=19, 0:3:0.0555555555556:T=51,G=3,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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29 phiX174 1124 . T C 0 . AC=2;AF=0.0307692307692 GT:AC:AF:NC 0:0,2:0,0.117647058824:C=2,T=15,G=1, 0:0,0:0,0:T=48,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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30 phiX174 1125 . T G 0 . AC=3;AF=0.0454545454545 GT:AC:AF:NC 0:3:0.176470588235:T=14,G=3, 0:0:0:T=49,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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31 phiX174 1131 . T G 0 . AC=2;AF=0.025641025641 GT:AC:AF:NC 0:2:0.0952380952381:T=19,G=2, 0:0:0:T=57,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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32 phiX174 1141 . T G 0 . AC=2;AF=0.0253164556962 GT:AC:AF:NC 0:0:0:T=20,G=1, 0:2:0.0338983050847:T=57,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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33 phiX174 1145 . G C 0 . AC=2;AF=0.027397260274 GT:AC:AF:NC 0:2:0.0952380952381:C=2,G=19, 0:0:0:G=52,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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34 phiX174 1147 . T C 0 . AC=2;AF=0.0281690140845 GT:AC:AF:NC 0:2:0.0952380952381:C=2,T=19, 0:0:0:T=50,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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35 phiX174 1149 . T G,C 0 . AC=2,2;AF=0.027027027027,0.027027027027 GT:AC:AF:NC 0:2,2:0.1,0.1:C=2,T=16,G=2, 0:0,0:0,0:T=54,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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36 phiX174 1156 . T G 0 . AC=2;AF=0.031746031746 GT:AC:AF:NC 0:0:0:C=1,T=15, 0:2:0.0416666666667:T=46,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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37 phiX174 1159 . T C,G 0 . AC=2,2;AF=0.0298507462687,0.0298507462687 GT:AC:AF:NC 0:2,0:0.111111111111,0:C=2,T=16, 0:0,2:0,0.0408163265306:C=1,T=47,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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38 phiX174 1164 . T G 0 . AC=4;AF=0.0666666666667 GT:AC:AF:NC 0:0:0:C=1,T=16,G=1, 0:4:0.0909090909091:T=40,G=4,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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39 phiX174 1168 . T G 0 . AC=4;AF=0.0666666666667 GT:AC:AF:NC 0:2:0.0952380952381:C=1,T=19,G=2, 0:2:0.0512820512821:T=37,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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40 phiX174 1171 . T G 0 . AC=2;AF=0.0327868852459 GT:AC:AF:NC 0:2:0.0869565217391:T=21,G=2, 0:0:0:T=38,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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41 phiX174 1174 . C A 0 . AC=2;AF=0.0327868852459 GT:AC:AF:NC 0:2:0.0869565217391:A=2,C=21, 0:0:0:A=1,C=38,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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42 phiX174 1178 . G C 0 . AC=2;AF=0.0307692307692 GT:AC:AF:NC 0:2:0.0740740740741:C=2,T=1,G=25, 0:0:0:G=38,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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43 phiX174 1187 . T G 0 . AC=3;AF=0.04 GT:AC:AF:NC 0:3:0.0882352941176:C=1,T=31,G=3, 0:0:0:T=41,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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44 phiX174 1189 . T C 0 . AC=3;AF=0.0379746835443 GT:AC:AF:NC 0:3:0.0857142857143:C=3,T=32,G=1, 0:0:0:T=44,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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45 phiX174 1200 . T G 0 . AC=3;AF=0.0365853658537 GT:AC:AF:NC 0:3:0.0882352941176:T=31,G=3, 0:0:0:T=48,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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46 phiX174 1202 . T G 0 . AC=3;AF=0.0365853658537 GT:AC:AF:NC 0:0:0:T=32, 0:3:0.06:T=47,G=3,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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47 phiX174 1205 . A C 0 . AC=2;AF=0.0246913580247 GT:AC:AF:NC 0:2:0.0588235294118:A=32,C=2, 0:0:0:A=47,C=1,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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48 phiX174 1207 . T G 0 . AC=2;AF=0.0246913580247 GT:AC:AF:NC 0:0:0:A=1,T=34, 0:2:0.0425531914894:T=45,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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49 phiX174 1214 . G A 0 . AC=2;AF=0.0246913580247 GT:AC:AF:NC 0:0:0:T=1,G=34, 0:2:0.0425531914894:A=2,G=45,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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50 phiX174 1216 . C A 0 . AC=2;AF=0.0246913580247 GT:AC:AF:NC 0:0:0:C=34, 0:2:0.0425531914894:A=2,C=45,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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51 phiX174 1217 . C A 0 . AC=2;AF=0.025 GT:AC:AF:NC 0:2:0.0588235294118:A=2,C=32, 0:0:0:C=46,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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52 phiX174 1219 . T G 0 . AC=2;AF=0.025641025641 GT:AC:AF:NC 0:0:0:C=1,T=33,G=1, 0:2:0.0444444444444:T=43,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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203 phiX174 1866 . T G 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:0:0:T=19,G=1, 0:2:0.0645161290323:T=29,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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204 phiX174 1875 . T A 0 . AC=2;AF=0.0377358490566 GT:AC:AF:NC 0:2:0.0952380952381:A=2,T=19, 0:0:0:T=32,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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205 phiX174 1876 . T G 0 . AC=3;AF=0.0588235294118 GT:AC:AF:NC 0:3:0.157894736842:C=1,T=16,G=3, 0:0:0:T=32,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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206 phiX174 1882 . T G 0 . AC=2;AF=0.0377358490566 GT:AC:AF:NC 0:2:0.105263157895:T=17,G=2, 0:0:0:T=34,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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207 phiX174 1889 . A C 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:2:0.0869565217391:A=21,C=2, 0:0:0:A=27,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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208 phiX174 1913 . G C 0 . AC=2;AF=0.04 GT:AC:AF:NC 0:0:0:G=27, 0:2:0.0869565217391:C=2,G=21,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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209 phiX174 1915 . T G 0 . AC=2;AF=0.0425531914894 GT:AC:AF:NC 0:0:0:A=1,T=24, 0:2:0.0869565217391:T=21,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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210 phiX174 1917 . A T 0 . AC=2;AF=0.0444444444444 GT:AC:AF:NC 0:2,0:0.0833333333333,0:A=22,T=2,G=1, 0:0,0:0,0:A=21,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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211 phiX174 1930 . T A 0 . AC=2;AF=0.0526315789474 GT:AC:AF:NC 0:2:0.0909090909091:A=2,T=20, 0:0:0:T=16,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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212 phiX174 1934 . A C 0 . AC=2;AF=0.0512820512821 GT:AC:AF:NC 0:2:0.0952380952381:A=19,C=2,T=1, 0:0:0:A=18,C=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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213 phiX174 1940 . A C 0 . AC=2;AF=0.046511627907 GT:AC:AF:NC 0:2:0.0952380952381:A=19,C=2, 0:0:0:A=22,C=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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214 phiX174 1942 . T G 0 . AC=2;AF=0.047619047619 GT:AC:AF:NC 0:0:0:T=19, 0:2:0.0869565217391:T=21,G=2,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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215 phiX174 1945 . T G 0 . AC=3;AF=0.0769230769231 GT:AC:AF:NC 0:0:0:T=15,G=1, 0:3:0.125:T=21,G=3,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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216 phiX174 1954 . T C 0 . AC=2;AF=0.0625 GT:AC:AF:NC 0:0,0:0,0:T=12,G=1, 0:0,2:0,0.1:C=2,T=18,G=1,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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217 phiX174 1959 . T G 0 . AC=2;AF=0.0555555555556 GT:AC:AF:NC 0:2:0.153846153846:T=11,G=2, 0:0:0:T=23,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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218 phiX174 1994 . A C 0 . AC=2;AF=0.0512820512821 GT:AC:AF:NC 0:2:0.153846153846:A=11,C=2, 0:0:0:A=26,
74d4e986f488 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/vcflib/vcfgeno2haplo commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
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219 phiX174 1998 . A G 0 . AC=2;AF=0.05 GT:AC:AF:NC 0:2:0.142857142857:A=12,G=2, 0:0:0:A=26,