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author devteam
date Thu, 22 Jun 2017 18:52:09 -0400
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1 <tool id="tables_arithmetic_operations" name="Arithmetic Operations" version="1.0.0">
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2 <description>on tables</description>
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3 <requirements>
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4 <requirement type="package" version="5.22.2.1">perl</requirement>
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5 </requirements>
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6 <command><![CDATA[
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7 perl '$__tool_directory__/tables_arithmetic_operations.pl'
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8 '$inputFile1'
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9 '$inputFile2'
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10 $inputArithmeticOperation3
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11 '$outputFile1'
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12 ]]></command>
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13 <inputs>
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14 <param name="inputFile1" type="data" format="tabular" label="Select the first input tabular file"/>
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15 <param name="inputFile2" type="data" format="tabular" label="Select the second input tabular file"/>
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16 <param name="inputArithmeticOperation3" type="select" label="Choose the arithmetic operation:">
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17 <option value="Addition">Addition</option>
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18 <option value="Subtraction">Subtraction</option>
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19 <option value="Multiplication">Multiplication</option>
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20 <option value="Division">Division</option>
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21 </param>
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22 </inputs>
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23 <outputs>
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24 <data name="outputFile1" format="tabular" />
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25 </outputs>
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26 <tests>
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27 <test>
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28 <param name="inputFile1" value="numericalTable1.tabular" />
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29 <param name="inputFile2" value="numericalTable1.tabular" />
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30 <param name="inputArithmeticOperation3" value="Addition" />
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31 <output name="outputFile1" file="table_addition_result.tabular" />
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32 </test>
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33 <test>
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34 <param name="inputFile1" value="numericalTable1.tabular" />
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35 <param name="inputFile2" value="numericalTable1.tabular" />
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36 <param name="inputArithmeticOperation3" value="Subtraction" />
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37 <output name="outputFile1" file="table_subtraction_result.tabular" />
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38 </test>
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39 <test>
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40 <param name="inputFile1" value="numericalTable1.tabular" />
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41 <param name="inputFile2" value="numericalTable1.tabular" />
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42 <param name="inputArithmeticOperation3" value="Multiplication" />
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43 <output name="outputFile1" file="table_multiplication_result.tabular" />
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44 </test>
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45 <test>
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46 <param name="inputFile1" value="numericalTable1.tabular" />
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47 <param name="inputFile2" value="numericalTable1.tabular" />
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48 <param name="inputArithmeticOperation3" value="Division" />
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49 <output name="outputFile1" file="table_division_result.tabular" />
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50 </test>
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51 </tests>
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52 <help><![CDATA[
0
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53 .. class:: infomark
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54
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55 **What it does**
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56
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57 This program implements arithmetic operations on tabular files data. The program takes three inputs:
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58
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59 - The first input is a TABULAR format file containing numbers only.
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60 - The second input is a TABULAR format file containing numbers only.
1
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61 - The third input is an arithmetic operation: +, -, x, or / for addition, subtraction, multiplication, or division, respectively.
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62 - The output file is a TABULAR format file containing the result of implementing the arithmetic operation on both input files.
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63
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64
1
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65 Notes:
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66
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67 - The two files must have the same number of columns and the same number of rows.
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68 - The output file has the same number of columns and the same number of rows as each of the two input files.
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69 - In case of division, none of the values in the second input file could be 0, otherwise the program will stop and report an error.
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70
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71 **Example**
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72
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73 Let us have the first input file as follows::
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74
1
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80
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81 And the second input file as follows::
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82
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88
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89 Running the program and choosing "Addition" as an arithmetic operation will give the following output::
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90
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3fde957695f6 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/gops/tables_arithmetic_operations commit cae3e05d02e60f595bb8b6d77a84f030e9bd1689
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96 ]]></help>
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6ff325b36382 Imported from capsule None
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97 </tool>