Mercurial > repos > devteam > samtools_mpileup
changeset 5:9b8d98f0e6b2 draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/samtools/samtools_mpileup commit de7140295cce07e1bc1697e51dab4271c8d7a8a6
| author | devteam |
|---|---|
| date | Fri, 18 Dec 2015 19:45:10 -0500 |
| parents | 5872c9894a37 |
| children | 483949f5c3b0 |
| files | macros.xml tool_dependencies.xml |
| diffstat | 2 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/macros.xml Mon Nov 09 12:24:45 2015 -0500 +++ b/macros.xml Fri Dec 18 19:45:10 2015 -0500 @@ -41,7 +41,7 @@ </citations> </xml> <xml name="version_command"> - <version_command>samtools --version | head -n 1 | awk '{ print $2 }'</version_command> + <version_command>echo $(samtools --version | head -n 1)", "$(samtools --version | grep -o -E "htslib.*?")</version_command> </xml> <xml name="stdio"> <stdio>
--- a/tool_dependencies.xml Mon Nov 09 12:24:45 2015 -0500 +++ b/tool_dependencies.xml Fri Dec 18 19:45:10 2015 -0500 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> <package name="samtools" version="1.2"> - <repository changeset_revision="192f00129358" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="a55970300738" name="package_samtools_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>