view test-data/samtools_flagstat_out1.tsv @ 10:9b44224f5a76 draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/samtools_flagstat commit 0f75269223c0821c6c82acf98fde947d0f816f2b"
author iuc
date Tue, 28 Sep 2021 16:02:06 +0000
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200	0	total (QC-passed reads + QC-failed reads)
200	0	primary
0	0	secondary
0	0	supplementary
0	0	duplicates
0	0	primary duplicates
25	0	mapped
12.50%	N/A	mapped %
25	0	primary mapped
12.50%	N/A	primary mapped %
200	0	paired in sequencing
100	0	read1
100	0	read2
0	0	properly paired
0.00%	N/A	properly paired %
0	0	with itself and mate mapped
25	0	singletons
12.50%	N/A	singletons %
0	0	with mate mapped to a different chr
0	0	with mate mapped to a different chr (mapQ>=5)