Mercurial > repos > devteam > quality_filter
changeset 1:0c48b354dcfe draft default tip
planemo upload commit 33927a87ba2eee9bf0ecdd376a66241b17b3d734
| author | devteam |
|---|---|
| date | Tue, 13 Oct 2015 12:28:59 -0400 |
| parents | 5da8dce9fd62 |
| children | |
| files | quality_filter.xml tool_dependencies.xml |
| diffstat | 2 files changed, 8 insertions(+), 8 deletions(-) [+] |
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--- a/quality_filter.xml Tue Apr 01 09:13:08 2014 -0400 +++ b/quality_filter.xml Tue Oct 13 12:28:59 2015 -0400 @@ -34,8 +34,8 @@ <filter type="data_meta" ref="input" key="species" /> </options> </param> - <param name="score" size="10" type="integer" value="20" label="Quality score cut-off" help="Cut-off value of 20 means mask all nucleotides having quality score less than or equal to 20"/> - <param name="mask_char" size="5" type="select" label="Mask character"> + <param name="score" type="integer" value="20" label="Quality score cut-off" help="Cut-off value of 20 means mask all nucleotides having quality score less than or equal to 20"/> + <param name="mask_char" type="select" label="Mask character"> <option value="0" selected="true">#</option> <option value="1">$</option> <option value="2">^</option> @@ -53,14 +53,14 @@ <when value="0"> </when> <when value="1"> - <param name="length" size="10" type="integer" value="2" label="Number of right-side neighbors"/> + <param name="length" type="integer" value="2" label="Number of right-side neighbors"/> </when> <when value="2"> - <param name="length" size="10" type="integer" value="2" label="Number of left-side neighbors"/> + <param name="length" type="integer" value="2" label="Number of left-side neighbors"/> </when> <when value="3"> - <param name="lengthr" size="10" type="integer" value="2" label="Number of neighbors on right-side" /> - <param name="lengthl" size="10" type="integer" value="2" label="Number of neighbors on left-side" /> + <param name="lengthr" type="integer" value="2" label="Number of neighbors on right-side" /> + <param name="lengthl" type="integer" value="2" label="Number of neighbors on left-side" /> </when> </conditional> </inputs>
--- a/tool_dependencies.xml Tue Apr 01 09:13:08 2014 -0400 +++ b/tool_dependencies.xml Tue Oct 13 12:28:59 2015 -0400 @@ -1,9 +1,9 @@ <?xml version="1.0"?> <tool_dependency> <package name="bx-python" version="0.7.1"> - <repository changeset_revision="cdb5991f9790" name="package_bx_python_0_7" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="35e2457234ef" name="package_bx_python_0_7" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="numpy" version="1.7.1"> - <repository changeset_revision="55a7a5e9d63f" name="package_numpy_1_7" owner="devteam" prior_installation_required="False" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="55a7a5e9d63f" name="package_numpy_1_7" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>