Mercurial > repos > devteam > picard
view test-data/picard_QualityScoreDistribution_test1.tab @ 3:52fdfc45590a draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author | devteam |
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date | Thu, 16 Jul 2015 15:32:31 -0400 |
parents | |
children | 486d7500da69 |
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## htsjdk.samtools.metrics.StringHeader # picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false ## htsjdk.samtools.metrics.StringHeader # Started on: Wed Oct 15 14:31:45 EDT 2014 ## HISTOGRAM java.lang.Byte QUALITY COUNT_OF_Q 6 704 7 2044 8 745 9 2761 10 1193 11 723 12 1766 13 1467 14 1400 15 1463 16 478 17 831 18 330 19 904 20 1538 21 2953 22 565 23 4270 24 1496 25 5178 26 3992 27 3779 28 3074 29 2909 30 19446 31 3520 32 13368 33 9203 34 22271 35 24655 36 64306 37 38212 38 95777 39 67370 40 36926