Mercurial > repos > devteam > picard
diff test-data/picard_QualityScoreDistribution_test1.tab @ 3:52fdfc45590a draft
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit 00a7926c285bc4a339bd7deebf40b28f39c7d947-dirty
author | devteam |
---|---|
date | Thu, 16 Jul 2015 15:32:31 -0400 |
parents | |
children | 486d7500da69 |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/picard_QualityScoreDistribution_test1.tab Thu Jul 16 15:32:31 2015 -0400 @@ -0,0 +1,44 @@ +## htsjdk.samtools.metrics.StringHeader +# picard.analysis.QualityScoreDistribution CHART_OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_968.dat ALIGNED_READS_ONLY=false PF_READS_ONLY=false INCLUDE_NO_CALLS=false INPUT=/Users/anton/galaxy-central/database/files/000/dataset_966.dat OUTPUT=/Users/anton/galaxy-central/database/files/000/dataset_967.dat REFERENCE_SEQUENCE=localref.fa ASSUME_SORTED=true VERBOSITY=ERROR QUIET=true VALIDATION_STRINGENCY=LENIENT STOP_AFTER=0 COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false +## htsjdk.samtools.metrics.StringHeader +# Started on: Wed Oct 15 14:31:45 EDT 2014 + + +## HISTOGRAM java.lang.Byte +QUALITY COUNT_OF_Q +6 704 +7 2044 +8 745 +9 2761 +10 1193 +11 723 +12 1766 +13 1467 +14 1400 +15 1463 +16 478 +17 831 +18 330 +19 904 +20 1538 +21 2953 +22 565 +23 4270 +24 1496 +25 5178 +26 3992 +27 3779 +28 3074 +29 2909 +30 19446 +31 3520 +32 13368 +33 9203 +34 22271 +35 24655 +36 64306 +37 38212 +38 95777 +39 67370 +40 36926 +