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annotate tool_dependencies.xml @ 0:ff4ec13e496e draft

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author devteam
date Tue, 23 Oct 2012 10:49:35 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="picard" version="1.56.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="shell_command">mkdir picard</action>
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7 <action type="shell_command">wget --quiet -O picard-tools-1.56.zip http://downloads.sourceforge.net/project/picard/picard-tools/1.56/picard-tools-1.56.zip</action>
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8 <action type="shell_command">unzip picard-tools-1.56.zip</action>
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9 <action type="move_directory_files">
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10 <source_directory>picard-tools-1.56</source_directory>
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11 <destination_directory>$INSTALL_DIR/jars</destination_directory>
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12 </action>
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13 <action type="set_environment">
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14 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
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15 </action>
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16 </actions>
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17 </install>
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18 <readme>
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19 </readme>
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20 </package>
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21 </tool_dependency>