Mercurial > repos > devteam > picard

annotate test-data/picard_CollectRnaSeqMetrics.gff3 @ 10:126c30841c38 draft

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planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
author devteam
date Thu, 08 Dec 2016 06:43:24 -0500
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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10
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
1 ##gff-version 3
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
2 chrM hg19_knownGene gene 236 368 0.000000 - . ID=uc004coq.4;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
3 chrM hg19_knownGene mRNA 236 368 0.000000 - . ID=uc004coq.4.m;Parent=uc004coq.4;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
4 chrM hg19_knownGene exon 236 368 0.000000 - . ID=uc004coq.4.e;Parent=uc004coq.4.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
5 chrM hg19_knownGene gene 651 674 0.000000 + . ID=uc022bqo.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
6 chrM hg19_knownGene mRNA 651 674 0.000000 + . ID=uc022bqo.2.m;Parent=uc022bqo.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
7 chrM hg19_knownGene exon 651 674 0.000000 + . ID=uc022bqo.2.e;Parent=uc022bqo.2.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
8 chrM hg19_knownGene gene 1604 1634 0.000000 + . ID=uc004cor.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
9 chrM hg19_knownGene mRNA 1604 1634 0.000000 + . ID=uc004cor.1.m;Parent=uc004cor.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
10 chrM hg19_knownGene exon 1604 1634 0.000000 + . ID=uc004cor.1.e;Parent=uc004cor.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
11 chrM hg19_knownGene gene 1844 4264 0.000000 + . ID=uc004cos.5;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
12 chrM hg19_knownGene mRNA 1844 4264 0.000000 + . ID=uc004cos.5.m;Parent=uc004cos.5;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
13 chrM hg19_knownGene exon 1844 4264 0.000000 + . ID=uc004cos.5.e;Parent=uc004cos.5.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
14 chrM hg19_knownGene gene 5544 5566 0.000000 - . ID=uc022bqp.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
15 chrM hg19_knownGene mRNA 5544 5566 0.000000 - . ID=uc022bqp.1.m;Parent=uc022bqp.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
16 chrM hg19_knownGene exon 5544 5566 0.000000 - . ID=uc022bqp.1.e;Parent=uc022bqp.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
17 chrM hg19_knownGene gene 5586 5606 0.000000 - . ID=uc022bqq.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
18 chrM hg19_knownGene mRNA 5586 5606 0.000000 - . ID=uc022bqq.1.m;Parent=uc022bqq.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
19 chrM hg19_knownGene exon 5586 5606 0.000000 - . ID=uc022bqq.1.e;Parent=uc022bqq.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
20 chrM hg19_knownGene gene 5691 5714 0.000000 - . ID=uc022bqr.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
21 chrM hg19_knownGene mRNA 5691 5714 0.000000 - . ID=uc022bqr.1.m;Parent=uc022bqr.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
22 chrM hg19_knownGene exon 5691 5714 0.000000 - . ID=uc022bqr.1.e;Parent=uc022bqr.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
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diff changeset
23 chrM hg19_knownGene gene 5905 7439 0.000000 + . ID=uc031tga.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
24 chrM hg19_knownGene mRNA 5905 7439 0.000000 + . ID=uc031tga.1.m;Parent=uc031tga.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
25 chrM hg19_knownGene exon 5905 7439 0.000000 + . ID=uc031tga.1.e;Parent=uc031tga.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
26 chrM hg19_knownGene gene 7587 7982 0.000000 - . ID=uc022bqs.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
27 chrM hg19_knownGene mRNA 7587 7982 0.000000 - . ID=uc022bqs.1.m;Parent=uc022bqs.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
28 chrM hg19_knownGene exon 7587 7982 0.000000 - . ID=uc022bqs.1.e;Parent=uc022bqs.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
29 chrM hg19_knownGene gene 15504 15888 0.000000 - . ID=uc022bqs.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
30 chrM hg19_knownGene mRNA 15504 15888 0.000000 - . ID=uc022bqs.1.m;Parent=uc022bqs.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
31 chrM hg19_knownGene exon 15504 15888 0.000000 - . ID=uc022bqs.1.e;Parent=uc022bqs.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
32 chrM hg19_knownGene gene 7587 9208 0.000000 + . ID=uc011mfi.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
33 chrM hg19_knownGene mRNA 7587 9208 0.000000 + . ID=uc011mfi.2.m;Parent=uc011mfi.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
34 chrM hg19_knownGene exon 7587 9208 0.000000 + . ID=uc011mfi.2.e;Parent=uc011mfi.2.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
35 chrM hg19_knownGene gene 8367 8472 0.000000 - . ID=uc022bqt.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
36 chrM hg19_knownGene mRNA 8367 8472 0.000000 - . ID=uc022bqt.1.m;Parent=uc022bqt.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
37 chrM hg19_knownGene exon 8367 8472 0.000000 - . ID=uc022bqt.1.e;Parent=uc022bqt.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
38 chrM hg19_knownGene gene 13450 14149 0.000000 - . ID=uc022bqt.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
39 chrM hg19_knownGene mRNA 13450 14149 0.000000 - . ID=uc022bqt.1.m;Parent=uc022bqt.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
40 chrM hg19_knownGene exon 13450 14149 0.000000 - . ID=uc022bqt.1.e;Parent=uc022bqt.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
41 chrM hg19_knownGene gene 10060 10404 0.000000 + . ID=uc022bqu.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
42 chrM hg19_knownGene mRNA 10060 10404 0.000000 + . ID=uc022bqu.2.m;Parent=uc022bqu.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
43 chrM hg19_knownGene exon 10060 10404 0.000000 + . ID=uc022bqu.2.e;Parent=uc022bqu.2.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
44 chrM hg19_knownGene gene 10471 12138 0.000000 + . ID=uc004cov.5;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
45 chrM hg19_knownGene mRNA 10471 12138 0.000000 + . ID=uc004cov.5.m;Parent=uc004cov.5;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
46 chrM hg19_knownGene exon 10471 12138 0.000000 + . ID=uc004cov.5.e;Parent=uc004cov.5.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
47 chrM hg19_knownGene gene 10761 11231 0.000000 - . ID=uc031tgb.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
48 chrM hg19_knownGene mRNA 10761 11231 0.000000 - . ID=uc031tgb.1.m;Parent=uc031tgb.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
49 chrM hg19_knownGene exon 10761 11231 0.000000 - . ID=uc031tgb.1.e;Parent=uc031tgb.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
50 chrM hg19_knownGene gene 13979 14149 0.000000 - . ID=uc031tgb.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
51 chrM hg19_knownGene mRNA 13979 14149 0.000000 - . ID=uc031tgb.1.m;Parent=uc031tgb.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
52 chrM hg19_knownGene exon 13979 14149 0.000000 - . ID=uc031tgb.1.e;Parent=uc031tgb.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
53 chrM hg19_knownGene gene 12208 12264 0.000000 + . ID=uc004cow.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
54 chrM hg19_knownGene mRNA 12208 12264 0.000000 + . ID=uc004cow.2.m;Parent=uc004cow.2;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
55 chrM hg19_knownGene exon 12208 12264 0.000000 + . ID=uc004cow.2.e;Parent=uc004cow.2.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
56 chrM hg19_knownGene gene 12908 14149 0.000000 + . ID=uc004cox.4;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
57 chrM hg19_knownGene mRNA 12908 14149 0.000000 + . ID=uc004cox.4.m;Parent=uc004cox.4;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
58 chrM hg19_knownGene exon 12908 14149 0.000000 + . ID=uc004cox.4.e;Parent=uc004cox.4.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
59 chrM hg19_knownGene gene 14675 14698 0.000000 - . ID=uc022bqv.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
60 chrM hg19_knownGene mRNA 14675 14698 0.000000 - . ID=uc022bqv.1.m;Parent=uc022bqv.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
61 chrM hg19_knownGene exon 14675 14698 0.000000 - . ID=uc022bqv.1.e;Parent=uc022bqv.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
62 chrM hg19_knownGene gene 14857 15888 0.000000 + . ID=uc022bqw.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
63 chrM hg19_knownGene mRNA 14857 15888 0.000000 + . ID=uc022bqw.1.m;Parent=uc022bqw.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
64 chrM hg19_knownGene exon 14857 15888 0.000000 + . ID=uc022bqw.1.e;Parent=uc022bqw.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
65 chrM hg19_knownGene gene 15960 16024 0.000000 - . ID=uc022bqx.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
66 chrM hg19_knownGene mRNA 15960 16024 0.000000 - . ID=uc022bqx.1.m;Parent=uc022bqx.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
67 chrM hg19_knownGene exon 15960 16024 0.000000 - . ID=uc022bqx.1.e;Parent=uc022bqx.1.m;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
68 chrM hg19_knownGene gene 15999 16571 0.000000 + . ID=uc004coz.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
69 chrM hg19_knownGene mRNA 15999 16571 0.000000 + . ID=uc004coz.1.m;Parent=uc004coz.1;
126c30841c38 planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/picard commit f65b40f4eb3c3431b8d9213f86238deebfd6bc29
devteam
parents:
diff changeset
70 chrM hg19_knownGene exon 15999 16571 0.000000 + . ID=uc004coz.1.e;Parent=uc004coz.1.m;