annotate tool_dependencies.xml @ 1:6334612a010e draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
author devteam
date Thu, 12 Nov 2015 15:01:32 -0500
parents 195699b1562a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
1 <?xml version="1.0"?>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
2 <tool_dependency>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
3 <package name="galaxy_sequence_utils" version="1.0.0">
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
4 <install version="1.0">
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
5 <actions>
1
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
6 <action type="download_by_url">http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.0-st.tgz</action>
0
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
7 <action type="make_directory">$INSTALL_DIR/lib/python</action>
1
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
8 <action type="shell_command">
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
9 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
10 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
11 </action>
0
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
12 <action type="set_environment">
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
13 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable>
1
6334612a010e planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_galaxy_utils_1_0 commit 3c87e034041272fd3abd9afc2e7cd8f00c3b2033
devteam
parents: 0
diff changeset
14 <environment_variable name="GALAXY_SEQUENCE_UTILS_ROOT" action="set_to">$INSTALL_DIR</environment_variable>
0
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
15 </action>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
16 </actions>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
17 </install>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
18 <readme>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
19 </readme>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
20 </package>
195699b1562a Imported from capsule None
devteam
parents:
diff changeset
21 </tool_dependency>