Mercurial > repos > devteam > package_fastqc_0_10_1

annotate tool_dependencies.xml @ 0:507a63b59195 draft default tip

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author devteam
date Thu, 23 Jan 2014 12:30:32 -0500
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="FastQC" version="0.10.1">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://www.bioinformatics.babraham.ac.uk/projects/fastqc/fastqc_v0.10.1.zip</action>
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7 <action type="move_directory_files">
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8 <source_directory>.</source_directory>
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9 <destination_directory>$INSTALL_DIR</destination_directory>
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10 </action>
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11 <action type="chmod">
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12 <file mode="755">$INSTALL_DIR/fastqc</file>
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13 </action>
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14 <action type="set_environment">
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15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
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16 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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17 </action>
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18 </actions>
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19 </install>
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20 <readme></readme>
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21 </package>
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22 </tool_dependency>