changeset 38:2be8f8cc13de draft

planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/ncbi_blast_plus commit d6b8f7e6a7c316bb9a70aec22ad5767956d4ea11-dirty
author peterjc
date Tue, 23 Oct 2018 10:40:59 -0400
parents 996c3ef26f37
children 5dd84f7ab575
files tools/ncbi_blast_plus/README.rst tools/ncbi_blast_plus/ncbi_blastdbcmd_wrapper.xml tools/ncbi_blast_plus/ncbi_macros.xml tools/ncbi_blast_plus/ncbi_tblastn_wrapper.xml
diffstat 4 files changed, 5 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tools/ncbi_blast_plus/README.rst	Tue Oct 23 08:38:16 2018 -0400
+++ b/tools/ncbi_blast_plus/README.rst	Tue Oct 23 10:40:59 2018 -0400
@@ -264,6 +264,8 @@
           output format it must be mapped to different command line arguments.
         - Extend gzipped query support to all the command line tools.
         - Workaround for gzipped support under Galaxy release 16.01 or older.
+v0.3.2  - Fixed incomplete ``@CLI_OPTIONS@`` macro in the help text for the
+          ``tblastn`` and ``blastdbcmd`` wrappers.
 ======= ======================================================================
 
 
--- a/tools/ncbi_blast_plus/ncbi_blastdbcmd_wrapper.xml	Tue Oct 23 08:38:16 2018 -0400
+++ b/tools/ncbi_blast_plus/ncbi_blastdbcmd_wrapper.xml	Tue Oct 23 10:40:59 2018 -0400
@@ -131,7 +131,7 @@
 
 -------
 
-@CLI_OPTIONS
+@CLI_OPTIONS@
 
 -------
 
--- a/tools/ncbi_blast_plus/ncbi_macros.xml	Tue Oct 23 08:38:16 2018 -0400
+++ b/tools/ncbi_blast_plus/ncbi_macros.xml	Tue Oct 23 10:40:59 2018 -0400
@@ -1,5 +1,5 @@
 <macros>
-    <token name="@WRAPPER_VERSION@">0.3.1</token>
+    <token name="@WRAPPER_VERSION@">0.3.2</token>
     <xml name="parallelism">
         <!-- If job splitting is enabled, break up the query file into parts -->
         <parallelism method="multi" split_inputs="query" split_mode="to_size" split_size="1000" merge_outputs="output1" />
--- a/tools/ncbi_blast_plus/ncbi_tblastn_wrapper.xml	Tue Oct 23 08:38:16 2018 -0400
+++ b/tools/ncbi_blast_plus/ncbi_tblastn_wrapper.xml	Tue Oct 23 10:40:59 2018 -0400
@@ -166,7 +166,7 @@
 
 ------
 
-@CLI_OPTIONS
+@CLI_OPTIONS@
 
 ------