Mercurial > repos > devteam > gffread

annotate test-data/Homo_sapiens.GRCh37_19.71.gtf @ 0:baeea9c2ff0f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
author devteam
date Mon, 09 Nov 2015 12:06:36 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
1 19 snRNA exon 223158 223261 . - . gene_id "ENSG00000222329"; transcript_id "ENST00000410397"; exon_number "1"; gene_name "U6"; gene_biotype "snRNA"; transcript_name "U6.795-201"; exon_id "ENSE00001807043";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
2 19 unprocessed_pseudogene exon 230084 230165 . - . gene_id "ENSG00000267600"; transcript_id "ENST00000587910"; exon_number "1"; gene_name "AC098474.1"; gene_biotype "pseudogene"; transcript_name "AC098474.1-001"; exon_id "ENSE00002913508";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
3 19 unprocessed_pseudogene exon 229640 229709 . - . gene_id "ENSG00000267600"; transcript_id "ENST00000587910"; exon_number "2"; gene_name "AC098474.1"; gene_biotype "pseudogene"; transcript_name "AC098474.1-001"; exon_id "ENSE00002957540";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
4 19 processed_pseudogene exon 239145 239247 . - . gene_id "ENSG00000267305"; transcript_id "ENST00000588755"; exon_number "1"; gene_name "CTD-3113P16.7"; gene_biotype "pseudogene"; transcript_name "CTD-3113P16.7-001"; exon_id "ENSE00002958670";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
5 19 processed_pseudogene exon 279495 280170 . + . gene_id "ENSG00000267447"; transcript_id "ENST00000589981"; exon_number "1"; gene_name "VN2R11P"; gene_biotype "pseudogene"; transcript_name "VN2R11P-001"; exon_id "ENSE00002783831";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
6 19 protein_coding exon 291285 291386 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00001234447";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
7 19 protein_coding CDS 291285 291336 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
8 19 protein_coding start_codon 291334 291336 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
9 19 protein_coding exon 288020 288171 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00003304149";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
10 19 protein_coding CDS 288020 288171 . - 2 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
11 19 protein_coding exon 287474 287751 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00003352024";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
12 19 protein_coding CDS 287474 287751 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
13 19 protein_coding exon 282752 282809 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00000951309";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
14 19 protein_coding CDS 282752 282809 . - 1 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
15 19 protein_coding exon 282134 282310 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00000951310";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
16 19 protein_coding CDS 282134 282310 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
17 19 protein_coding exon 281043 281537 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; exon_id "ENSE00000951311";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
18 19 protein_coding CDS 281391 281537 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001"; protein_id "ENSP00000269812";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
19 19 protein_coding stop_codon 281388 281390 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000269812"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
20 19 protein_coding exon 291326 291393 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00001632516";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
21 19 protein_coding exon 288020 288171 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00003413809";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
22 19 protein_coding CDS 288020 288055 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; protein_id "ENSP00000388565";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
23 19 protein_coding start_codon 288053 288055 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
24 19 protein_coding exon 287474 287751 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00003352024";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
25 19 protein_coding CDS 287474 287751 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; protein_id "ENSP00000388565";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
26 19 protein_coding exon 282752 282809 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00000951309";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
27 19 protein_coding CDS 282752 282809 . - 1 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; protein_id "ENSP00000388565";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
28 19 protein_coding exon 282134 282310 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00000951310";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
29 19 protein_coding CDS 282134 282310 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; protein_id "ENSP00000388565";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
30 19 protein_coding exon 281345 281537 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; exon_id "ENSE00002907933";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
31 19 protein_coding CDS 281391 281537 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003"; protein_id "ENSP00000388565";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
32 19 protein_coding stop_codon 281388 281390 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000434325"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-003";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
33 19 protein_coding exon 290952 291200 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00001319061";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
34 19 protein_coding CDS 290952 291066 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
35 19 protein_coding start_codon 291064 291066 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
36 19 protein_coding exon 288020 288171 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00003304149";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
37 19 protein_coding CDS 288020 288171 . - 2 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
38 19 protein_coding exon 287474 287751 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00003352024";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
39 19 protein_coding CDS 287474 287751 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
40 19 protein_coding exon 282752 282809 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00000951309";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
41 19 protein_coding CDS 282752 282809 . - 1 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "4"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
42 19 protein_coding exon 282134 282310 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00000951310";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
43 19 protein_coding CDS 282134 282310 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "5"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
44 19 protein_coding exon 281388 281537 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; exon_id "ENSE00002880410";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
45 19 protein_coding CDS 281391 281537 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004"; protein_id "ENSP00000329697";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
46 19 protein_coding stop_codon 281388 281390 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000327790"; exon_number "6"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-004";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
47 19 protein_coding exon 287474 287636 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; exon_id "ENSE00002759074";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
48 19 protein_coding CDS 287474 287636 . - 2 gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; protein_id "ENSP00000466947";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
49 19 protein_coding exon 282752 282809 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; exon_id "ENSE00000951309";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
50 19 protein_coding CDS 282752 282809 . - 1 gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; protein_id "ENSP00000466947";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
51 19 protein_coding exon 281991 282310 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; exon_id "ENSE00002933809";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
52 19 protein_coding CDS 282125 282310 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007"; protein_id "ENSP00000466947";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
53 19 protein_coding stop_codon 282122 282124 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000586998"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-007";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
54 19 retained_intron exon 288020 288530 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000589672"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-006"; exon_id "ENSE00002840772";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
55 19 retained_intron exon 287161 287751 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000589672"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-006"; exon_id "ENSE00002776480";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
56 19 protein_coding exon 291285 291382 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; exon_id "ENSE00002791055";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
57 19 protein_coding CDS 291285 291336 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; protein_id "ENSP00000466545";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
58 19 protein_coding start_codon 291334 291336 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "1"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
59 19 protein_coding exon 288020 288189 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; exon_id "ENSE00002878170";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
60 19 protein_coding CDS 288020 288189 . - 2 gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "2"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; protein_id "ENSP00000466545";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
61 19 protein_coding exon 287474 287751 . - . gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; exon_id "ENSE00003239753";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
62 19 protein_coding CDS 287474 287751 . - 0 gene_id "ENSG00000141934"; transcript_id "ENST00000591572"; exon_number "3"; gene_name "PPAP2C"; gene_biotype "protein_coding"; transcript_name "PPAP2C-005"; protein_id "ENSP00000466545";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
63 19 antisense exon 305573 305703 . + . gene_id "ENSG00000267124"; transcript_id "ENST00000591533"; exon_number "1"; gene_name "CTD-3113P16.5"; gene_biotype "antisense"; transcript_name "CTD-3113P16.5-002"; exon_id "ENSE00002878924";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
64 19 antisense exon 306057 306467 . + . gene_id "ENSG00000267124"; transcript_id "ENST00000591533"; exon_number "2"; gene_name "CTD-3113P16.5"; gene_biotype "antisense"; transcript_name "CTD-3113P16.5-002"; exon_id "ENSE00002959967";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
65 19 antisense exon 305579 305934 . + . gene_id "ENSG00000267124"; transcript_id "ENST00000589092"; exon_number "1"; gene_name "CTD-3113P16.5"; gene_biotype "antisense"; transcript_name "CTD-3113P16.5-001"; exon_id "ENSE00002949825";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
66 19 antisense exon 325624 325706 . + . gene_id "ENSG00000267124"; transcript_id "ENST00000589092"; exon_number "2"; gene_name "CTD-3113P16.5"; gene_biotype "antisense"; transcript_name "CTD-3113P16.5-001"; exon_id "ENSE00002925708";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
67 19 protein_coding exon 344774 344793 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00001775612";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
68 19 protein_coding CDS 344774 344782 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
69 19 protein_coding start_codon 344780 344782 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
70 19 protein_coding exon 336083 336173 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "2"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00003249146";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
71 19 protein_coding CDS 336083 336173 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "2"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
72 19 protein_coding exon 334400 334542 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "3"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00003454548";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
73 19 protein_coding CDS 334400 334542 . - 2 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "3"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
74 19 protein_coding exon 327864 327989 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "4"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00003387646";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
75 19 protein_coding CDS 327864 327989 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "4"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
76 19 protein_coding exon 327133 327256 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "5"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000680848";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
77 19 protein_coding CDS 327133 327256 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "5"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
78 19 protein_coding exon 326507 326598 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "6"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000680884";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
79 19 protein_coding CDS 326507 326598 . - 2 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "6"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
80 19 protein_coding exon 325635 325704 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "7"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000854366";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
81 19 protein_coding CDS 325635 325704 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "7"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
82 19 protein_coding exon 313492 313643 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "8"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000854367";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
83 19 protein_coding CDS 313492 313643 . - 2 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "8"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
84 19 protein_coding exon 312191 312272 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "9"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000854368";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
85 19 protein_coding CDS 312191 312272 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "9"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
86 19 protein_coding exon 311845 311939 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "10"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000854369";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
87 19 protein_coding CDS 311845 311939 . - 2 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "10"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
88 19 protein_coding exon 308801 308925 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "11"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000680979";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
89 19 protein_coding CDS 308801 308925 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "11"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
90 19 protein_coding exon 308577 308665 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "12"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000681037";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
91 19 protein_coding CDS 308577 308665 . - 1 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "12"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
92 19 protein_coding exon 307119 307536 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "13"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00000854370";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
93 19 protein_coding CDS 307119 307536 . - 2 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "13"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
94 19 protein_coding exon 305575 306711 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "14"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; exon_id "ENSE00001228230";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
95 19 protein_coding CDS 306693 306711 . - 1 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "14"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001"; protein_id "ENSP00000264819";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
96 19 protein_coding stop_codon 306690 306692 . - 0 gene_id "ENSG00000105556"; transcript_id "ENST00000264819"; exon_number "14"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
97 19 retained_intron exon 336083 336178 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000586994"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-004"; exon_id "ENSE00002823143";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
98 19 retained_intron exon 334400 334542 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000586994"; exon_number "2"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-004"; exon_id "ENSE00003423537";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
99 19 retained_intron exon 327864 327989 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000586994"; exon_number "3"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-004"; exon_id "ENSE00003448031";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
100 19 retained_intron exon 326607 327256 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000586994"; exon_number "4"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-004"; exon_id "ENSE00002767848";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
101 19 retained_intron exon 340514 340599 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000592722"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-003"; exon_id "ENSE00002928990";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
102 19 retained_intron exon 336083 336173 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000592722"; exon_number "2"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-003"; exon_id "ENSE00003348065";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
103 19 retained_intron exon 334400 334542 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000592722"; exon_number "3"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-003"; exon_id "ENSE00003423537";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
104 19 retained_intron exon 330264 330380 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000592722"; exon_number "4"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-003"; exon_id "ENSE00002866727";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
105 19 retained_intron exon 327864 327989 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000592722"; exon_number "5"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-003"; exon_id "ENSE00003448031";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
106 19 retained_intron exon 344774 344798 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000587966"; exon_number "1"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-002"; exon_id "ENSE00002955543";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
107 19 retained_intron exon 334115 334542 . - . gene_id "ENSG00000105556"; transcript_id "ENST00000587966"; exon_number "2"; gene_name "MIER2"; gene_biotype "protein_coding"; transcript_name "MIER2-002"; exon_id "ENSE00002972279";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
108 19 protein_coding exon 375663 376013 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00001395673";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
109 19 protein_coding CDS 375663 375970 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
110 19 protein_coding start_codon 375968 375970 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
111 19 protein_coding exon 374299 374421 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00000836250";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
112 19 protein_coding CDS 374299 374421 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
113 19 protein_coding exon 373940 374011 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00000836249";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
114 19 protein_coding CDS 373940 374011 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
115 19 protein_coding exon 373470 373531 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "4"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00003264843";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
116 19 protein_coding CDS 373470 373531 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "4"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
117 19 protein_coding exon 372631 372700 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "5"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00003360178";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
118 19 protein_coding CDS 372631 372700 . - 2 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "5"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
119 19 protein_coding exon 371205 371322 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "6"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00003230159";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
120 19 protein_coding CDS 371205 371322 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "6"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
121 19 protein_coding exon 367065 367224 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "7"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00003319354";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
122 19 protein_coding CDS 367065 367224 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "7"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
123 19 protein_coding exon 361750 362426 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "8"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; exon_id "ENSE00002148596";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
124 19 protein_coding CDS 362203 362426 . - 2 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "8"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001"; protein_id "ENSP00000340088";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
125 19 protein_coding stop_codon 362200 362202 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000342640"; exon_number "8"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
126 19 retained_intron exon 374299 374620 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000530711"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-002"; exon_id "ENSE00002193557";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
127 19 retained_intron exon 367065 367224 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000530711"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-002"; exon_id "ENSE00003227230";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
128 19 retained_intron exon 362058 362426 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000530711"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-002"; exon_id "ENSE00000854364";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
129 19 protein_coding exon 375663 375970 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00002146492";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
130 19 protein_coding CDS 375663 375970 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
131 19 protein_coding start_codon 375968 375970 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
132 19 protein_coding exon 374299 374421 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00000836250";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
133 19 protein_coding CDS 374299 374421 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
134 19 protein_coding exon 373470 373531 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00003264843";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
135 19 protein_coding CDS 373470 373531 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
136 19 protein_coding exon 372631 372700 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "4"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00003360178";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
137 19 protein_coding CDS 372631 372700 . - 2 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "4"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
138 19 protein_coding exon 371205 371322 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "5"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00003230159";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
139 19 protein_coding CDS 371205 371322 . - 1 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "5"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
140 19 protein_coding exon 367065 367224 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "6"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00003319354";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
141 19 protein_coding CDS 367065 367224 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "6"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
142 19 protein_coding exon 362200 362426 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "7"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; exon_id "ENSE00002164408";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
143 19 protein_coding CDS 362203 362426 . - 2 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "7"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004"; protein_id "ENSP00000264820";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
144 19 protein_coding stop_codon 362200 362202 . - 0 gene_id "ENSG00000105549"; transcript_id "ENST00000346878"; exon_number "7"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-004";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
145 19 retained_intron exon 373940 374249 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000528213"; exon_number "1"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-003"; exon_id "ENSE00002143538";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
146 19 retained_intron exon 373470 373531 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000528213"; exon_number "2"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-003"; exon_id "ENSE00003295099";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
147 19 retained_intron exon 372631 372700 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000528213"; exon_number "3"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-003"; exon_id "ENSE00003345358";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
148 19 retained_intron exon 371205 371322 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000528213"; exon_number "4"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-003"; exon_id "ENSE00003322701";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
149 19 retained_intron exon 367202 367224 . - . gene_id "ENSG00000105549"; transcript_id "ENST00000528213"; exon_number "5"; gene_name "THEG"; gene_biotype "protein_coding"; transcript_name "THEG-003"; exon_id "ENSE00002184569";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
150 19 processed_transcript exon 397589 397633 . + . gene_id "ENSG00000267443"; transcript_id "ENST00000591757"; exon_number "1"; gene_name "AC010641.1"; gene_biotype "processed_transcript"; transcript_name "AC010641.1-001"; exon_id "ENSE00002968653";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
151 19 processed_transcript exon 398690 398941 . + . gene_id "ENSG00000267443"; transcript_id "ENST00000591757"; exon_number "2"; gene_name "AC010641.1"; gene_biotype "processed_transcript"; transcript_name "AC010641.1-001"; exon_id "ENSE00002946754";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
152 19 protein_coding exon 409006 409139 . - . gene_id "ENSG00000183186"; transcript_id "ENST00000332235"; exon_number "1"; gene_name "C2CD4C"; gene_biotype "protein_coding"; transcript_name "C2CD4C-001"; exon_id "ENSE00001322986";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
153 19 protein_coding exon 405445 408401 . - . gene_id "ENSG00000183186"; transcript_id "ENST00000332235"; exon_number "2"; gene_name "C2CD4C"; gene_biotype "protein_coding"; transcript_name "C2CD4C-001"; exon_id "ENSE00001290344";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
154 19 protein_coding CDS 407099 408361 . - 0 gene_id "ENSG00000183186"; transcript_id "ENST00000332235"; exon_number "2"; gene_name "C2CD4C"; gene_biotype "protein_coding"; transcript_name "C2CD4C-001"; protein_id "ENSP00000328677";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
155 19 protein_coding start_codon 408359 408361 . - 0 gene_id "ENSG00000183186"; transcript_id "ENST00000332235"; exon_number "2"; gene_name "C2CD4C"; gene_biotype "protein_coding"; transcript_name "C2CD4C-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
156 19 protein_coding stop_codon 407096 407098 . - 0 gene_id "ENSG00000183186"; transcript_id "ENST00000332235"; exon_number "2"; gene_name "C2CD4C"; gene_biotype "protein_coding"; transcript_name "C2CD4C-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
157 19 retained_intron exon 418923 419879 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000587423"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-004"; exon_id "ENSE00002743827";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
158 19 retained_intron exon 416583 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000587423"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-004"; exon_id "ENSE00002808156";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
159 19 retained_intron exon 422146 422828 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000588376"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-003"; exon_id "ENSE00002892555";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
160 19 retained_intron exon 418923 419056 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000588376"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-003"; exon_id "ENSE00003335296";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
161 19 retained_intron exon 416583 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000588376"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-003"; exon_id "ENSE00002808156";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
162 19 protein_coding exon 460529 460996 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00000910017";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
163 19 protein_coding CDS 460529 460996 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
164 19 protein_coding start_codon 460994 460996 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
165 19 protein_coding exon 440862 440932 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00000910018";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
166 19 protein_coding CDS 440862 440932 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
167 19 protein_coding exon 438970 439030 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003318574";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
168 19 protein_coding CDS 438970 439030 . - 1 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
169 19 protein_coding exon 438718 438837 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003403512";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
170 19 protein_coding CDS 438718 438837 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
171 19 protein_coding exon 436630 436683 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003433710";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
172 19 protein_coding CDS 436630 436683 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
173 19 protein_coding exon 436380 436431 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003456055";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
174 19 protein_coding CDS 436380 436431 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
175 19 protein_coding exon 436165 436291 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "7"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003445594";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
176 19 protein_coding CDS 436165 436291 . - 2 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "7"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
177 19 protein_coding exon 434709 434865 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "8"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003279961";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
178 19 protein_coding CDS 434709 434865 . - 1 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "8"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
179 19 protein_coding exon 430684 430747 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "9"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003411504";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
180 19 protein_coding CDS 430684 430747 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "9"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
181 19 protein_coding exon 425097 425231 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "10"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003346785";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
182 19 protein_coding CDS 425097 425231 . - 2 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "10"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
183 19 protein_coding exon 422146 422456 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "11"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003242600";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
184 19 protein_coding CDS 422146 422456 . - 2 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "11"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
185 19 protein_coding exon 418923 419056 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "12"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00003416239";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
186 19 protein_coding CDS 418931 419056 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "12"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; protein_id "ENSP00000264554";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
187 19 protein_coding stop_codon 418928 418930 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "12"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
188 19 protein_coding exon 416593 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000264554"; exon_number "13"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-001"; exon_id "ENSE00002859506";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
189 19 retained_intron exon 440862 441384 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00002827226";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
190 19 retained_intron exon 438970 439030 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003402889";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
191 19 retained_intron exon 438718 438837 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003395825";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
192 19 retained_intron exon 436380 436683 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00002772124";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
193 19 retained_intron exon 436165 436291 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003246998";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
194 19 retained_intron exon 434709 434865 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003374593";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
195 19 retained_intron exon 430684 430747 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "7"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003410356";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
196 19 retained_intron exon 425097 425231 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "8"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003408923";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
197 19 retained_intron exon 422146 422456 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "9"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003318443";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
198 19 retained_intron exon 418923 419056 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "10"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00003335296";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
199 19 retained_intron exon 416609 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000589922"; exon_number "11"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-002"; exon_id "ENSE00002844526";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
200 19 nonsense_mediated_decay exon 436165 436258 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00003310050";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
201 19 nonsense_mediated_decay CDS 436165 436258 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; protein_id "ENSP00000465764";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
202 19 nonsense_mediated_decay exon 434709 434865 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00003268205";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
203 19 nonsense_mediated_decay CDS 434765 434865 . - 2 gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; protein_id "ENSP00000465764";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
204 19 nonsense_mediated_decay stop_codon 434762 434764 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
205 19 nonsense_mediated_decay exon 430684 430747 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00003410356";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
206 19 nonsense_mediated_decay exon 422146 422379 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00002865248";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
207 19 nonsense_mediated_decay exon 418923 419056 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00003335296";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
208 19 nonsense_mediated_decay exon 417200 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590170"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-009"; exon_id "ENSE00002818892";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
209 19 processed_transcript exon 436165 436258 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00003457976";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
210 19 processed_transcript exon 434709 434865 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00003374593";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
211 19 processed_transcript exon 430684 430747 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00003410356";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
212 19 processed_transcript exon 422146 422379 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00002865248";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
213 19 processed_transcript exon 418923 419056 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00003335296";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
214 19 processed_transcript exon 417200 417322 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591948"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-012"; exon_id "ENSE00002818892";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
215 19 nonsense_mediated_decay exon 460529 460571 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00002751684";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
216 19 nonsense_mediated_decay CDS 460529 460571 . - 1 gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; protein_id "ENSP00000466869";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
217 19 nonsense_mediated_decay exon 440862 440932 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00000910018";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
218 19 nonsense_mediated_decay CDS 440862 440932 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; protein_id "ENSP00000466869";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
219 19 nonsense_mediated_decay exon 439233 439491 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00002814497";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
220 19 nonsense_mediated_decay CDS 439401 439491 . - 1 gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; protein_id "ENSP00000466869";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
221 19 nonsense_mediated_decay stop_codon 439398 439400 . - 0 gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
222 19 nonsense_mediated_decay exon 438970 439030 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00003402889";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
223 19 nonsense_mediated_decay exon 438718 438837 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00003395825";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
224 19 nonsense_mediated_decay exon 436630 436683 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00003247612";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
225 19 nonsense_mediated_decay exon 436380 436431 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "7"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00003281498";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
226 19 nonsense_mediated_decay exon 436165 436291 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "8"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00003246998";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
227 19 nonsense_mediated_decay exon 434702 434865 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590222"; exon_number "9"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-007"; exon_id "ENSE00002906645";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
228 19 retained_intron exon 436380 436534 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591388"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-005"; exon_id "ENSE00002932006";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
229 19 retained_intron exon 436165 436291 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591388"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-005"; exon_id "ENSE00003246998";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
230 19 retained_intron exon 435771 435961 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000591388"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-005"; exon_id "ENSE00002737539";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
231 19 processed_transcript exon 438970 439031 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "1"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00002823960";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
232 19 processed_transcript exon 438718 438837 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "2"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00003395825";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
233 19 processed_transcript exon 436630 436683 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "3"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00003247612";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
234 19 processed_transcript exon 436380 436431 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "4"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00003281498";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
235 19 processed_transcript exon 436165 436291 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "5"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00003246998";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
236 19 processed_transcript exon 435779 435961 . - . gene_id "ENSG00000129946"; transcript_id "ENST00000590113"; exon_number "6"; gene_name "SHC2"; gene_biotype "protein_coding"; transcript_name "SHC2-011"; exon_id "ENSE00002795417";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
237 19 rRNA exon 453134 453245 . + . gene_id "ENSG00000252539"; transcript_id "ENST00000516730"; exon_number "1"; gene_name "RNA5SP462"; gene_biotype "rRNA"; transcript_name "RNA5SP462-201"; exon_id "ENSE00002089007";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
238 19 protein_coding exon 474621 474983 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; exon_id "ENSE00001215510";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
239 19 protein_coding CDS 474621 474747 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; protein_id "ENSP00000318029";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
240 19 protein_coding start_codon 474745 474747 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
241 19 protein_coding exon 472394 472501 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "2"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; exon_id "ENSE00001215495";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
242 19 protein_coding CDS 472394 472501 . - 2 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "2"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; protein_id "ENSP00000318029";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
243 19 protein_coding exon 467649 467762 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; exon_id "ENSE00003309716";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
244 19 protein_coding CDS 467649 467762 . - 2 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; protein_id "ENSP00000318029";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
245 19 protein_coding exon 463346 464364 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "4"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; exon_id "ENSE00001215506";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
246 19 protein_coding CDS 463847 464364 . - 2 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "4"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001"; protein_id "ENSP00000318029";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
247 19 protein_coding stop_codon 463844 463846 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000315489"; exon_number "4"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
248 19 protein_coding exon 474621 474880 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; exon_id "ENSE00002823522";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
249 19 protein_coding CDS 474621 474747 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; protein_id "ENSP00000372143";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
250 19 protein_coding start_codon 474745 474747 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
251 19 protein_coding exon 467649 467762 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "2"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; exon_id "ENSE00003309716";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
252 19 protein_coding CDS 467649 467762 . - 2 gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "2"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; protein_id "ENSP00000372143";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
253 19 protein_coding exon 463467 464364 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; exon_id "ENSE00002754043";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
254 19 protein_coding CDS 463847 464364 . - 2 gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002"; protein_id "ENSP00000372143";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
255 19 protein_coding stop_codon 463844 463846 . - 0 gene_id "ENSG00000181781"; transcript_id "ENST00000382696"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-002";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
256 19 retained_intron exon 472394 472631 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000591681"; exon_number "1"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-003"; exon_id "ENSE00002755864";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
257 19 retained_intron exon 467649 467762 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000591681"; exon_number "2"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-003"; exon_id "ENSE00003433927";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
258 19 retained_intron exon 464146 464364 . - . gene_id "ENSG00000181781"; transcript_id "ENST00000591681"; exon_number "3"; gene_name "ODF3L2"; gene_biotype "protein_coding"; transcript_name "ODF3L2-003"; exon_id "ENSE00002869176";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
259 19 processed_transcript exon 489176 490039 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000587541"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-004"; exon_id "ENSE00002869129";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
260 19 processed_transcript exon 501669 501929 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000587541"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-004"; exon_id "ENSE00003336294";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
261 19 processed_transcript exon 504745 505342 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000587541"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-004"; exon_id "ENSE00002834240";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
262 19 protein_coding exon 496454 496551 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; exon_id "ENSE00001155662";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
263 19 protein_coding CDS 496500 496551 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; protein_id "ENSP00000304247";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
264 19 protein_coding start_codon 496500 496502 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
265 19 protein_coding exon 497833 498117 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; exon_id "ENSE00000892393";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
266 19 protein_coding CDS 497833 498117 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; protein_id "ENSP00000304247";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
267 19 protein_coding exon 498496 498825 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; exon_id "ENSE00000655528";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
268 19 protein_coding CDS 498496 498825 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; protein_id "ENSP00000304247";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
269 19 protein_coding exon 504745 505207 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "4"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; exon_id "ENSE00002750345";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
270 19 protein_coding CDS 504745 504962 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "4"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001"; protein_id "ENSP00000304247";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
271 19 protein_coding stop_codon 504963 504965 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000346144"; exon_number "4"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
272 19 protein_coding exon 496454 496551 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; exon_id "ENSE00001155662";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
273 19 protein_coding CDS 496500 496551 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; protein_id "ENSP00000215637";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
274 19 protein_coding start_codon 496500 496502 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
275 19 protein_coding exon 497833 498117 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; exon_id "ENSE00000892393";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
276 19 protein_coding CDS 497833 498117 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; protein_id "ENSP00000215637";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
277 19 protein_coding exon 498496 498825 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; exon_id "ENSE00000655528";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
278 19 protein_coding CDS 498496 498825 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; protein_id "ENSP00000215637";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
279 19 protein_coding exon 501669 501929 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "4"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; exon_id "ENSE00003448468";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
280 19 protein_coding CDS 501669 501929 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "4"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; protein_id "ENSP00000215637";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
281 19 protein_coding exon 504745 505347 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "5"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; exon_id "ENSE00002791863";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
282 19 protein_coding CDS 504745 504962 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "5"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002"; protein_id "ENSP00000215637";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
283 19 protein_coding stop_codon 504963 504965 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000215637"; exon_number "5"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-002";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
284 19 protein_coding exon 496500 496551 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; exon_id "ENSE00002252200";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
285 19 protein_coding CDS 496500 496551 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; protein_id "ENSP00000372130";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
286 19 protein_coding start_codon 496500 496502 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "1"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
287 19 protein_coding exon 498496 498825 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; exon_id "ENSE00000655528";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
288 19 protein_coding CDS 498496 498825 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "2"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; protein_id "ENSP00000372130";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
289 19 protein_coding exon 504745 504965 . + . gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; exon_id "ENSE00002232672";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
290 19 protein_coding CDS 504745 504962 . + 2 gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003"; protein_id "ENSP00000372130";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
291 19 protein_coding stop_codon 504963 504965 . + 0 gene_id "ENSG00000099866"; transcript_id "ENST00000382683"; exon_number "3"; gene_name "MADCAM1"; gene_biotype "protein_coding"; transcript_name "MADCAM1-003";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
292 19 antisense exon 507376 507813 . - . gene_id "ENSG00000266933"; transcript_id "ENST00000592413"; exon_number "1"; gene_name "AC005775.2"; gene_biotype "antisense"; transcript_name "AC005775.2-001"; exon_id "ENSE00002966233";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
293 19 antisense exon 501541 501624 . - . gene_id "ENSG00000266933"; transcript_id "ENST00000592413"; exon_number "2"; gene_name "AC005775.2"; gene_biotype "antisense"; transcript_name "AC005775.2-001"; exon_id "ENSE00002861098";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
294 19 antisense exon 490046 490353 . - . gene_id "ENSG00000266933"; transcript_id "ENST00000592413"; exon_number "3"; gene_name "AC005775.2"; gene_biotype "antisense"; transcript_name "AC005775.2-001"; exon_id "ENSE00001885597";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
295 19 protein_coding exon 507299 507844 . + . gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "1"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001"; exon_id "ENSE00000951304";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
296 19 protein_coding CDS 507507 507844 . + 0 gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "1"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001"; protein_id "ENSP00000352265";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
297 19 protein_coding start_codon 507507 507509 . + 0 gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "1"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
298 19 protein_coding exon 518889 519654 . + . gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "2"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001"; exon_id "ENSE00001431625";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
299 19 protein_coding CDS 518889 519420 . + 1 gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "2"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001"; protein_id "ENSP00000352265";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
300 19 protein_coding stop_codon 519421 519423 . + 0 gene_id "ENSG00000141933"; transcript_id "ENST00000359315"; exon_number "2"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-001";
baeea9c2ff0f planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tool_collections/cufflinks/gffread commit 5a4e0ca9992af3a6e5ed2b533f04bb82ce761e0b
devteam
parents:
diff changeset
301 19 retained_intron exon 507500 510372 . + . gene_id "ENSG00000141933"; transcript_id "ENST00000588278"; exon_number "1"; gene_name "TPGS1"; gene_biotype "protein_coding"; transcript_name "TPGS1-002"; exon_id "ENSE00002882282";