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annotate test-data/fastqc_contaminants.txt @ 17:7b0207bd2183 draft

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author iuc
date Fri, 10 May 2019 14:23:28 -0400
parents 92d9da2a738d
children 7d3cef9c42ca
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1 # This file contains a list of potential contaminants which are
5b995cef2fbb planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit bff04a5409662a8968c50501487042a3a0c93702
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2 # frequently found in high throughput sequencing reactions. These
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iuc
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3 # are mostly sequences of adapters / primers used in the various
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iuc
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4 # sequencing chemistries.
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5 #
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iuc
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6 # Please DO NOT rely on these sequences to design your own oligos, some
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7 # of them are truncated at ambiguous positions, and none of them are
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8 # definitive sequences from the manufacturers so don't blame us if you
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iuc
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9 # try to use them and they don't work.
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iuc
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10 #
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11 # You can add more sequences to the file by putting one line per entry
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iuc
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12 # and specifying a name[tab]sequence. If the contaminant you add is
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iuc
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13 # likely to be of use to others please consider sending it to the FastQ
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iuc
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14 # authors, either via a bug report at www.bioinformatics.bbsrc.ac.uk/bugzilla/
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iuc
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15 # or by directly emailing simon.andrews@bbsrc.ac.uk so other users of
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16 # the program can benefit.
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17
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iuc
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18 Illumina Single End Apapter 1 ACACTCTTTCCCTACACGACGCTGTTCCATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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19 Illumina Single End Apapter 2 CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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20 Illumina Single End PCR Primer 1 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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21 Illumina Single End PCR Primer 2 CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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22 Illumina Single End Sequencing Primer ACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
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iuc
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24 Illumina Paired End Adapter 1 ACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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25 Illumina Paired End Adapter 2 CTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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26 Illumina Paried End PCR Primer 1 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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27 Illumina Paired End PCR Primer 2 CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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28 Illumina Paried End Sequencing Primer 1 ACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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29 Illumina Paired End Sequencing Primer 2 CGGTCTCGGCATTCCTACTGAACCGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
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31 Illumina DpnII expression Adapter 1 ACAGGTTCAGAGTTCTACAGTCCGAC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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32 Illumina DpnII expression Adapter 2 CAAGCAGAAGACGGCATACGA
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iuc
parents: 16
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33 Illumina DpnII expression PCR Primer 1 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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34 Illumina DpnII expression PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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35 Illumina DpnII expression Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
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iuc
parents: 16
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37 Illumina NlaIII expression Adapter 1 ACAGGTTCAGAGTTCTACAGTCCGACATG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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38 Illumina NlaIII expression Adapter 2 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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39 Illumina NlaIII expression PCR Primer 1 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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40 Illumina NlaIII expression PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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41 Illumina NlaIII expression Sequencing Primer CCGACAGGTTCAGAGTTCTACAGTCCGACATG
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43 Illumina Small RNA Adapter 1 GTTCAGAGTTCTACAGTCCGACGATC
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44 Illumina Small RNA Adapter 2 TCGTATGCCGTCTTCTGCTTGT
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iuc
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45 Illumina Small RNA RT Primer CAAGCAGAAGACGGCATACGA
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iuc
parents: 16
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46 Illumina Small RNA PCR Primer 1 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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47 Illumina Small RNA PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
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iuc
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48 Illumina Small RNA Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC
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50 Illumina Multiplexing Adapter 1 GATCGGAAGAGCACACGTCT
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51 Illumina Multiplexing Adapter 2 ACACTCTTTCCCTACACGACGCTCTTCCGATCT
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iuc
parents: 16
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52 Illumina Multiplexing PCR Primer 1.01 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
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iuc
parents: 16
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53 Illumina Multiplexing PCR Primer 2.01 GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
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iuc
parents: 16
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54 Illumina Multiplexing Read1 Sequencing Primer ACACTCTTTCCCTACACGACGCTCTTCCGATCT
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iuc
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55 Illumina Multiplexing Index Sequencing Primer GATCGGAAGAGCACACGTCTGAACTCCAGTCAC
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iuc
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56 Illumina Multiplexing Read2 Sequencing Primer GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
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58 Illumina PCR Primer Index 1 CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTC
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iuc
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59 Illumina PCR Primer Index 2 CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTC
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iuc
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60 Illumina PCR Primer Index 3 CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTC
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61 Illumina PCR Primer Index 4 CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTC
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iuc
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62 Illumina PCR Primer Index 5 CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTC
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iuc
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63 Illumina PCR Primer Index 6 CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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64 Illumina PCR Primer Index 7 CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
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65 Illumina PCR Primer Index 8 CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
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66 Illumina PCR Primer Index 9 CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTC
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67 Illumina PCR Primer Index 10 CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTC
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iuc
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68 Illumina PCR Primer Index 11 CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTC
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iuc
parents: 16
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69 Illumina PCR Primer Index 12 CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTC
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70
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71 Illumina DpnII Gex Adapter 1 GATCGTCGGACTGTAGAACTCTGAAC
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iuc
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72 Illumina DpnII Gex Adapter 1.01 ACAGGTTCAGAGTTCTACAGTCCGAC
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73 Illumina DpnII Gex Adapter 2 CAAGCAGAAGACGGCATACGA
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74 Illumina DpnII Gex Adapter 2.01 TCGTATGCCGTCTTCTGCTTG
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75 Illumina DpnII Gex PCR Primer 1 CAAGCAGAAGACGGCATACGA
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iuc
parents: 16
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76 Illumina DpnII Gex PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
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iuc
parents: 16
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77 Illumina DpnII Gex Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC
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79 Illumina NlaIII Gex Adapter 1.01 TCGGACTGTAGAACTCTGAAC
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iuc
parents: 16
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80 Illumina NlaIII Gex Adapter 1.02 ACAGGTTCAGAGTTCTACAGTCCGACATG
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parents: 16
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81 Illumina NlaIII Gex Adapter 2.01 CAAGCAGAAGACGGCATACGA
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iuc
parents: 16
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82 Illumina NlaIII Gex Adapter 2.02 TCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
83 Illumina NlaIII Gex PCR Primer 1 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
84 Illumina NlaIII Gex PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
85 Illumina NlaIII Gex Sequencing Primer CCGACAGGTTCAGAGTTCTACAGTCCGACATG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
86
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
87 Illumina Small RNA RT Primer CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
88 Illumina 5p RNA Adapter GTTCAGAGTTCTACAGTCCGACGATC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
89 Illumina RNA Adapter1 TCGTATGCCGTCTTCTGCTTGT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
90
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
91 Illumina Small RNA 3p Adapter 1 ATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
92 Illumina Small RNA PCR Primer 1 CAAGCAGAAGACGGCATACGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
93 Illumina Small RNA PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
94 Illumina Small RNA Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
95
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
96 TruSeq Universal Adapter AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
97 TruSeq Adapter, Index 1 GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
98 TruSeq Adapter, Index 2 GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
99 TruSeq Adapter, Index 3 GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
100 TruSeq Adapter, Index 4 GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
101 TruSeq Adapter, Index 5 GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
102 TruSeq Adapter, Index 6 GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
103 TruSeq Adapter, Index 7 GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
104 TruSeq Adapter, Index 8 GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTTGAATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
105 TruSeq Adapter, Index 9 GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
106 TruSeq Adapter, Index 10 GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
107 TruSeq Adapter, Index 11 GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
108 TruSeq Adapter, Index 12 GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCCGTCTTCTGCTTG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
109
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
110 Illumina RNA RT Primer GCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
111 Illumina RNA PCR Primer AATGATACGGCGACCACCGAGATCTACACGTTCAGAGTTCTACAGTCCGA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
112
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
113 RNA PCR Primer, Index 1 CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
114 RNA PCR Primer, Index 2 CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
115 RNA PCR Primer, Index 3 CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
116 RNA PCR Primer, Index 4 CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
117 RNA PCR Primer, Index 5 CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
118 RNA PCR Primer, Index 6 CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
119 RNA PCR Primer, Index 7 CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
120 RNA PCR Primer, Index 8 CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
121 RNA PCR Primer, Index 9 CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
122 RNA PCR Primer, Index 10 CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
123 RNA PCR Primer, Index 11 CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
124 RNA PCR Primer, Index 12 CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
125 RNA PCR Primer, Index 13 CAAGCAGAAGACGGCATACGAGATTTGACTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
126 RNA PCR Primer, Index 14 CAAGCAGAAGACGGCATACGAGATGGAACTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
127 RNA PCR Primer, Index 15 CAAGCAGAAGACGGCATACGAGATTGACATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
128 RNA PCR Primer, Index 16 CAAGCAGAAGACGGCATACGAGATGGACGGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
129 RNA PCR Primer, Index 17 CAAGCAGAAGACGGCATACGAGATCTCTACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
130 RNA PCR Primer, Index 18 CAAGCAGAAGACGGCATACGAGATGCGGACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
131 RNA PCR Primer, Index 19 CAAGCAGAAGACGGCATACGAGATTTTCACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
132 RNA PCR Primer, Index 20 CAAGCAGAAGACGGCATACGAGATGGCCACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
133 RNA PCR Primer, Index 21 CAAGCAGAAGACGGCATACGAGATCGAAACGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
134 RNA PCR Primer, Index 22 CAAGCAGAAGACGGCATACGAGATCGTACGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
135 RNA PCR Primer, Index 23 CAAGCAGAAGACGGCATACGAGATCCACTCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
136 RNA PCR Primer, Index 24 CAAGCAGAAGACGGCATACGAGATGCTACCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
137 RNA PCR Primer, Index 25 CAAGCAGAAGACGGCATACGAGATATCAGTGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
138 RNA PCR Primer, Index 26 CAAGCAGAAGACGGCATACGAGATGCTCATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
139 RNA PCR Primer, Index 27 CAAGCAGAAGACGGCATACGAGATAGGAATGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
140 RNA PCR Primer, Index 28 CAAGCAGAAGACGGCATACGAGATCTTTTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
141 RNA PCR Primer, Index 29 CAAGCAGAAGACGGCATACGAGATTAGTTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
142 RNA PCR Primer, Index 30 CAAGCAGAAGACGGCATACGAGATCCGGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
143 RNA PCR Primer, Index 31 CAAGCAGAAGACGGCATACGAGATATCGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
144 RNA PCR Primer, Index 32 CAAGCAGAAGACGGCATACGAGATTGAGTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
145 RNA PCR Primer, Index 33 CAAGCAGAAGACGGCATACGAGATCGCCTGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
146 RNA PCR Primer, Index 34 CAAGCAGAAGACGGCATACGAGATGCCATGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
147 RNA PCR Primer, Index 35 CAAGCAGAAGACGGCATACGAGATAAAATGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
148 RNA PCR Primer, Index 36 CAAGCAGAAGACGGCATACGAGATTGTTGGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
149 RNA PCR Primer, Index 37 CAAGCAGAAGACGGCATACGAGATATTCCGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
150 RNA PCR Primer, Index 38 CAAGCAGAAGACGGCATACGAGATAGCTAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
151 RNA PCR Primer, Index 39 CAAGCAGAAGACGGCATACGAGATGTATAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
152 RNA PCR Primer, Index 40 CAAGCAGAAGACGGCATACGAGATTCTGAGGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
153 RNA PCR Primer, Index 41 CAAGCAGAAGACGGCATACGAGATGTCGTCGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
154 RNA PCR Primer, Index 42 CAAGCAGAAGACGGCATACGAGATCGATTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
155 RNA PCR Primer, Index 43 CAAGCAGAAGACGGCATACGAGATGCTGTAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
156 RNA PCR Primer, Index 44 CAAGCAGAAGACGGCATACGAGATATTATAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
157 RNA PCR Primer, Index 45 CAAGCAGAAGACGGCATACGAGATGAATGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
158 RNA PCR Primer, Index 46 CAAGCAGAAGACGGCATACGAGATTCGGGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
159 RNA PCR Primer, Index 47 CAAGCAGAAGACGGCATACGAGATCTTCGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
160 RNA PCR Primer, Index 48 CAAGCAGAAGACGGCATACGAGATTGCCGAGTGACTGGAGTTCCTTGGCACCCGAGAATTCCA
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
161
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
162 ABI Dynabead EcoP Oligo CTGATCTAGAGGTACCGGATCCCAGCAGT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
163 ABI Solid3 Adapter A CTGCCCCGGGTTCCTCATTCTCTCAGCAGCATG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
164 ABI Solid3 Adapter B CCACTACGCCTCCGCTTTCCTCTCTATGGGCAGTCGGTGAT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
165 ABI Solid3 5' AMP Primer CCACTACGCCTCCGCTTTCCTCTCTATG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
166 ABI Solid3 3' AMP Primer CTGCCCCGGGTTCCTCATTCT
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
167 ABI Solid3 EF1 alpha Sense Primer CATGTGTGTTGAGAGCTTC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
168 ABI Solid3 EF1 alpha Antisense Primer GAAAACCAAAGTGGTCCAC
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
169 ABI Solid3 GAPDH Forward Primer TTAGCACCCCTGGCCAAGG
7b0207bd2183 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastqc commit 2f544e337886709995a93d53f394919ce8e4673a
iuc
parents: 16
diff changeset
170 ABI Solid3 GAPDH Reverse Primer CTTACTCCTTGGAGGCCATG